Caminibacter mediatlanticus: FE773_04895
Help
Entry
FE773_04895 CDS
T05985
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cmed
Caminibacter mediatlanticus
Pathway
cmed00300
Lysine biosynthesis
cmed00470
D-Amino acid metabolism
cmed01100
Metabolic pathways
cmed01110
Biosynthesis of secondary metabolites
cmed01120
Microbial metabolism in diverse environments
cmed01230
Biosynthesis of amino acids
Module
cmed_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cmed00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FE773_04895
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FE773_04895
Enzymes [BR:
cmed01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FE773_04895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QCT94536
LinkDB
All DBs
Position
879275..880606
Genome browser
AA seq
443 aa
AA seq
DB search
MYKKPVIEKIDTFASKVPSSPYKTQRIKKEIDGVDVYDLVKEFGSPLFVFSERDIENKYL
EFKEAFSSRYPDVEFWWSYKTNYLGAICKVFHKLGSKAEVVSEFEYQKARHLGIDGKDII
FNGPYKSKEALEVAVKEGAKIHIDHWDEINDLEEIADKLGVNIPVAIRCNMNTGVYPLWS
RFGFNIDNNEAYDAIKRIYEGKKLYLTGLHTHIGTFMLSADAYRVAAKKLTELKNRVEEE
FGFNIEYLDLGGGFASKNRLKGVYQPPEVIVPTPDDYAIAITDTIYATNKGNLPKLYLET
GRALIDEAGYLLTSVFASKRLPDGKVSYILDAGVNLLYTSFWYNFDIFLSKKYDDISELS
ILNGPLCMNIDVIADNIYLPPLNRGDVVTIAPVGAYNVTQWMQFIRYRPAVVLIDKNSNP
HLIREKEDLEDIIKREIIPEYLK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaaacctgtaattgaaaaaattgatacttttgcatcaaaagttccatcatca
ccttacaaaactcaaagaataaaaaaagagattgatggggttgatgtttatgacttagtt
aaagaatttggaagtccattatttgtatttagcgaaagagatatagaaaataaatattta
gaatttaaagaagcgtttagtagtaggtatcctgatgttgaattttggtggagttataaa
actaactatttaggtgctatttgcaaagtatttcataaacttggaagtaaagctgaggtt
gtaagtgagtttgaatatcaaaaagcaagacatttaggaattgatggaaaagatattatc
tttaatggtccatataaaagtaaagaagcattagaagttgctgtaaaagaaggtgcaaaa
attcatattgaccattgggatgagattaatgacttagaagagattgctgataaacttggc
gttaatattcctgttgctattagatgtaatatgaatacaggtgtatatccattatggagt
agatttggatttaatattgataataatgaagcatatgatgcaataaaaagaatatatgaa
ggaaaaaaattatatctaactggtcttcatactcatattggtacttttatgttaagcgca
gatgcttatagagttgctgctaaaaaattaacagaacttaaaaatagagttgaagaagag
tttggatttaatattgaatatcttgatttaggcggaggttttgcaagcaaaaatagatta
aaaggagtatatcaaccaccagaagtaattgtaccaactccagatgattatgcaattgca
attactgatacaatttatgcaacaaataagggaaatttaccaaaactttatcttgaaaca
ggtagggctttaattgatgaagcagggtatttattaacatcagtttttgcaagtaaaaga
cttccagatggaaaagttagttatattttagatgctggggttaatttactttatacatca
ttttggtataactttgatatatttttgagtaaaaaatatgatgatattagtgagttatct
atattaaatggaccattgtgtatgaatatagatgtaattgctgataatatttaccttcct
ccattaaatagaggcgatgttgtaacaattgcgccagttggtgcatataatgtaactcaa
tggatgcaatttattaggtatagaccagcagttgtgttaattgataaaaattctaatcct
catttaattagagaaaaagaggatttagaagatattataaaaagagaaataattccagaa
tatttaaaatga
DBGET
integrated database retrieval system