Caminibacter mediatlanticus: FE773_06115
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Entry
FE773_06115 CDS
T05985
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
cmed
Caminibacter mediatlanticus
Brite
KEGG Orthology (KO) [BR:
cmed00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cmed01011
]
FE773_06115
Enzymes [BR:
cmed01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FE773_06115
Peptidoglycan biosynthesis and degradation proteins [BR:
cmed01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FE773_06115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM_RLK
LysM1_NFP_LYK
NMB0315_dom_I
SLT_2
MetOD2
LepB_N
APP_N
Motif
Other DBs
NCBI-ProteinID:
QCT94769
LinkDB
All DBs
Position
complement(1131120..1132457)
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AA seq
445 aa
AA seq
DB search
MKKFLFIFIFNIFLFADILNQNNLNVLRALDINEGFLYYKPLKEKYDEYYYRKKRYFINI
LENGYDILPIIRKSILKSNIPSPLISVAMAESYFTLNAKSHKKATGLWQFMPSTAKKFGL
KIDEYVDERRDPIKSTKAAIEYLKYLHKFFGKWYLAVMAYNAGEARVVEAVVRAKVDKLC
EKLGKKCKKDKRIKEYRKIIRDYQREGRKKFLPLYKLYKKLDYIQIDLEDLLRFQKGLKR
QYLPKETRDYILKVLALSFLFSNDEFLKYSNSYILNSGVTPEFVRVNVSPGTSLYYVARF
LNINYKNLRKKNMQLKYSFTPPYKYYIYIPYKKLAFFKTHFKSKGRFLYVYKVKKGDTLL
KIAKMYGIKVKMIKDYNKLGKYLRVNQKLIIPLNERFVKYKVKPGDTLNKIALKFGVSYK
KIKRINRLKSNIIRVGEVIKIPQKL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttttatttatttttatttttaatatttttttatttgctgatattttaaat
caaaataatttaaatgttttaagagcattagatataaatgaaggctttttatattataaa
cctcttaaagaaaaatatgatgaatattactatcgaaaaaaaagatattttataaatatt
ttagaaaatggatatgatatacttcctattattaggaaaagtattttaaaatcaaacatt
ccttcacctttaatctcagttgctatggctgagagttattttaccttaaatgctaaatct
cataaaaaagcaacagggctttggcagtttatgccttcaactgcaaaaaaatttggatta
aaaattgatgagtatgtagatgagagaagagacccaataaaatctacaaaagctgcaatt
gaatatttaaaatatttacataaattttttggtaaatggtatttagctgtaatggcttat
aatgcaggtgaggcaagagttgtagaagcagtagtaagggcaaaagtagataaattatgt
gaaaaattaggaaaaaaatgtaaaaaagataagagaattaaagaatatagaaaaataata
agagattatcaaagagaaggaagaaaaaaatttttacctttatataagttatataaaaaa
ttagactacatccaaatagatttagaagacttattaaggtttcaaaaaggtttaaaaaga
caatatttaccaaaagagacaagagattatattttaaaagttttagctcttagcttttta
tttagtaatgatgagtttttaaaatattcaaactcttatattctaaatagtggtgtaaca
cctgaatttgttagggtaaatgtatcacctgggacttctttgtactatgttgcaagattt
ttaaatataaattataaaaatcttagaaaaaaaaatatgcaattaaaatactcttttaca
cctccttataaatattatatttatattccgtataaaaaacttgctttttttaaaacacat
tttaaatcaaaaggtagatttttatatgtctataaagtaaaaaagggtgatacattatta
aaaattgcaaaaatgtatggaattaaagtaaaaatgataaaagattataataaacttgga
aaatatttaagagtaaatcaaaaattaataattcctctaaatgagaggtttgtaaaatat
aaagtaaaaccaggtgatactttaaataaaattgctttaaaatttggagtttcttataaa
aaaattaaaagaattaatagattaaaaagtaatattataagggttggagaagtaataaaa
atacctcagaaattataa
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