Caminibacter mediatlanticus: FE773_06325
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Entry
FE773_06325 CDS
T05985
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cmed
Caminibacter mediatlanticus
Pathway
cmed00260
Glycine, serine and threonine metabolism
cmed00630
Glyoxylate and dicarboxylate metabolism
cmed00670
One carbon pool by folate
cmed00680
Methane metabolism
cmed01100
Metabolic pathways
cmed01110
Biosynthesis of secondary metabolites
cmed01120
Microbial metabolism in diverse environments
cmed01200
Carbon metabolism
cmed01230
Biosynthesis of amino acids
cmed01240
Biosynthesis of cofactors
cmed04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cmed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FE773_06325
09102 Energy metabolism
00680 Methane metabolism
FE773_06325
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FE773_06325
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FE773_06325
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FE773_06325
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FE773_06325
Enzymes [BR:
cmed01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FE773_06325
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QCT94810
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Position
complement(1169079..1170326)
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AA seq
415 aa
AA seq
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MSLRDYDIDVYSILEKELKRQTDHLEMIASENFTLPEVMEAQGSVFTNKYAEGYPNKRYY
GGCEYADLVEQLAIDRAKELFGCEFANVQPHSGSQANGAVYVALLKPYDKLLGMDLSNGG
HLTHGAKVNFSGKHYHSFSYGIDEKTGKIDYDRVRDIAKIVKPKMIVCGASAYPREIDFA
KFKEIADEVGAILMADIAHIAGLVVANEHPNPFPHCDVVTTTTHKTLRGPRGGLILTNNE
EYAKKINSAIFPGIQGGPLMHVIAAKAVGFKMNLAPSWKEYAKQVKANARVLAEVLLERG
YDLVSGGTDNHLVLVSFLNKEFSGKEAEEALGRAGITVNKNTVPGEKRSPFVTSGIRIGS
PALTARGMKEEEFRFIANKIADVLDDIYNLELQDKVKEELKELASKFVIYDRPTY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaagagattatgatattgatgtttattcaattttagaaaaagaattaaaaaga
caaacagaccatcttgaaatgattgcaagtgaaaattttactcttccagaagttatggaa
gcacaaggtagtgtatttactaataaatatgcagaaggttacccaaacaaaagatattat
ggtggatgtgaatatgcggatttagttgagcaacttgcaatcgatagagcaaaagaactt
tttggatgtgaatttgcaaatgttcagcctcattcaggttctcaggcaaatggagctgta
tacgttgcactattaaaaccatatgataagttacttggaatggatttaagcaatggtggg
catttaactcatggtgcaaaagttaacttttcaggtaaacattatcatagttttagttat
ggtattgatgaaaaaacaggaaaaattgattatgatagggtaagagatattgcaaaaata
gtcaaaccaaaaatgattgtttgtggtgcgagtgcatatccaagagagattgattttgca
aaatttaaagaaattgctgatgaagttggtgctattttaatggcagatattgcgcatata
gcaggacttgtagtagctaacgaacatcctaatccattccctcattgtgatgtagttaca
actacaactcataaaactctaagaggtccaagaggagggttaattcttacaaataatgaa
gagtatgctaaaaaaataaattcagcaatatttccaggaattcaaggtggacctttaatg
catgttatagctgcaaaagctgttggatttaaaatgaatttagcaccaagttggaaggaa
tatgcaaaacaagtaaaagcaaatgcaagagttttagctgaggttttacttgagagaggt
tatgatttagtaagtggtggtacagataatcatttagtattagtgagttttctaaataaa
gaatttagtggaaaagaagcagaagaagcacttggaagagctggaattacagtgaataaa
aacacagtacctggtgagaagaggagtccttttgttacaagtggtataagaattggctca
cctgcacttacagcaagaggaatgaaagaagaagagtttagatttattgcaaataaaata
gcagatgttttagatgatatttataatttagagcttcaagataaagtaaaagaagagcta
aaagaattagcaagtaaatttgttatttatgatagaccaacttattaa
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