Caminibacter mediatlanticus: FE773_08030
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Entry
FE773_08030 CDS
T05985
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cmed
Caminibacter mediatlanticus
Pathway
cmed03420
Nucleotide excision repair
cmed03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FE773_08030
03430 Mismatch repair
FE773_08030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmed03400
]
FE773_08030
Enzymes [BR:
cmed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FE773_08030
DNA repair and recombination proteins [BR:
cmed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FE773_08030
MMR (mismatch excision repair)
Other MMR factors
FE773_08030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
PcrA_UvrD_tudor
eIF3_p135
Cu
Ribosomal_L21e
Microtub_bd
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QCT95139
LinkDB
All DBs
Position
1496958..1498991
Genome browser
AA seq
677 aa
AA seq
DB search
MYKKIFDIIKIKSEKMDFLEELNEAQKKAATHIDGALLILAGAGSGKTKTLTSRLAYLLS
FGIDPANTLTLTFTNKAASEMRERALSLIQQNIPHPPLLLTFHKFGLLFLKLYIHLINRD
NNFVIIDSDDQKKILKSISADLPPNFMSKEISKYKNSFLTSDEVFALANEEVYKKLALIY
DKYQKYLLENNLVDFDDLLLLTYRILNENDDLAKEISQKYQYVMVDEYQDTNEIQLLLLK
KLCLTHNNICVVGDDDQSIYGFRGANHKNILDFEKDFNAEVIKLELNYRSTNQILTAANN
LISFNKNRYNKKLISALGDGKEVEVLENYNETAEAEVIAKRIKTLIDSGVSPNEIAILYR
INALSRSIEDGLRNYGIAYKLVGGMKFYEREEIKDLISYLRLIINPDDDYSFKRIVNKPR
RGIGKTTLIKLEEAKGNISFFKFIKDSSLKFLSKKAAKTLKEFTQIIEYFSTLNIEELIE
AIEEKIELSTSYKDEDKRRNIEEFYGMMRERNDLTLREFLNELSLESDQDKLSDNLINVM
TIHASKGLEFEYLFVIGLEEGFFPLNDADIEEERRLAYVAITRAKKELTLSYVKSRFLRG
QRENVKKSRFLTEAGLIKGERVNLQENSGIKKGTLVKHKVFGTGRVIGVNKAGNKIKLKI
DFGGSIREILSDFIEKA
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaaaatttttgatataattaaaataaaaagtgagaaaatggattttttagaa
gaattaaatgaagcacaaaaaaaagcagcaacacatattgatggcgcattacttatttta
gctggggctggaagtggaaaaacaaaaactttaacttcaaggcttgcatatttattatct
tttggaatagacccagctaatactctaactctaacttttacaaacaaagccgcaagtgag
atgagagagagagcattatctttaatacaacaaaacattcctcatcctcctttgcttctt
actttccataagtttggacttttatttttaaaactatatatccatttaattaatagagac
aataactttgtaattatcgatagtgatgaccaaaaaaaaatattaaaatcaatctcagct
gacctacctccaaattttatgagtaaagaaattagtaaatataaaaattcgtttttaacc
tctgatgaagtatttgcattagctaatgaagaagtttataaaaaattagctttaatttat
gataaatatcaaaaatatttacttgaaaataatttagtagattttgatgatttattactc
ctaacttatagaattttaaatgaaaacgatgatttagcaaaagaaatttcacaaaaatac
caatatgttatggtcgatgaataccaagatactaatgaaattcagttattattattaaaa
aaattatgcttaactcataataatatttgtgtagttggagatgatgaccaaagtatttat
ggatttagaggggctaatcataaaaatattttagattttgaaaaagattttaatgctgag
gttataaaacttgaacttaattaccgctcaacaaatcaaattttaacagcagctaataat
ttaattagttttaataaaaatagatacaacaaaaaactaatctcagcccttggagatgga
aaagaagtcgaagttcttgaaaattataatgaaacagcagaagcagaagtaattgctaaa
agaatcaaaactttaatagatagcggagtaagtccaaatgaaatagctatcctttataga
ataaatgcattatctcgctcaattgaagatggacttagaaactatgggattgcttataaa
ttagtaggaggtatgaaattctacgaaagagaagaaataaaagatttaataagttattta
agacttataataaatccagatgatgactattcatttaaaagaatagtaaataaaccaaga
agaggaataggaaaaactacactcattaaacttgaagaggcaaaaggaaatatttcattt
tttaaatttattaaagattcttctcttaaatttctaagtaaaaaagcagctaaaacttta
aaagaattcacccaaataatagaatatttttctactttaaatattgaagagttaatagaa
gccattgaagaaaaaattgaattatcaacttcatataaagatgaagataaaagaagaaat
attgaagaattctatggaatgatgagagagagaaatgatttaactctaagagagtttcta
aacgaactctctcttgaaagtgaccaagataaactctcagataatttaattaatgtaatg
acaattcatgcaagcaagggacttgaatttgaatatctttttgtaattggacttgaagaa
ggtttctttcctttaaatgatgcggacattgaagaagaaagaagacttgcatatgtagca
attacaagagctaaaaaagaactaaccctctcatatgtaaaaagtagatttttaagggga
caaagagaaaatgttaaaaaaagtagattcttaacagaagcaggacttattaaaggtgaa
agagtcaatctacaagaaaactcaggcattaaaaaaggtacattagtaaaacataaagta
tttggaactggaagagttattggagtaaataaagcaggaaataaaataaaactcaaaatt
gattttggcggtagtattagagaaattttgagtgattttattgaaaaagcataa
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