Caminibacter mediatlanticus: FE773_08035
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Entry
FE773_08035 CDS
T05985
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cmed
Caminibacter mediatlanticus
Brite
KEGG Orthology (KO) [BR:
cmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmed03016
]
FE773_08035 (truB)
Enzymes [BR:
cmed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FE773_08035 (truB)
Transfer RNA biogenesis [BR:
cmed03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FE773_08035 (truB)
Prokaryotic type
FE773_08035 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QCT95140
UniProt:
A0ABX5VA23
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All DBs
Position
1498996..1499838
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AA seq
280 aa
AA seq
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MKYEKLKCKNLLFVANKPMFISSNKFLNQLKKKYNIKKMGFSGTLDPFATGCLIIATGQY
TKLFRFLDKTPKTYIATLMLGAYSPTLDIEKIENIQLTPKIEKEKIIEVLNSFLGKQTQI
PPKYSAKKIDGKRAYALANKNIDIKLKEIEVEIYEIELINYSHPFITFRASVSEGTFIRT
LGLDIAKKLNTFGSLTYLERVNEGKFKYECEKPLNPLEFLKIPQNFYKNDINNLLLGKKL
DIKDFEIQQPGTYYIKYDKYFAIIEIKESIKYILNRIELC
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatgaaaagttaaaatgtaaaaatttattatttgtagcaaataaaccaatgttt
atatcttcaaacaaatttctaaatcaattgaaaaaaaaatataatattaaaaaaatgggc
ttttctggtacacttgacccatttgcaactggatgtttaataatagccacaggtcaatat
acaaaattatttagatttttagacaaaactccaaaaacttatattgcaacattaatgctt
ggtgcttactctcctactcttgatatagaaaaaattgaaaatatacaactaactcctaaa
atagaaaaagaaaaaattattgaagttttaaattcctttttaggaaaacaaactcaaata
cctccaaaatattctgctaaaaaaatagatggtaaaagagcttatgctcttgctaataaa
aatattgatattaaactaaaagagatagaagttgaaatttatgaaattgagctaattaac
tattctcatccttttataactttcagggcaagtgtaagtgaagggacttttattagaact
cttggtttagatatagctaaaaaattaaatacttttggaagcttaacctatcttgaaaga
gtgaatgaaggaaaatttaaatatgaatgtgaaaaaccactaaatcctcttgagttttta
aaaatacctcaaaatttttacaaaaatgacataaataatttgcttttaggaaaaaaactt
gatataaaagattttgaaattcaacaaccaggtacatattacatcaaatatgataaatat
tttgctattattgaaattaaagagagcataaaatatatactaaataggattgagttatgt
tag
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