KEGG   Chenggangzhangella methanolivorans: K6K41_00535
Entry
K6K41_00535       CDS       T07462                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
cmet  Chenggangzhangella methanolivorans
Pathway
cmet02024  Quorum sensing
cmet03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    K6K41_00535 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    K6K41_00535 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmet03019]
    K6K41_00535 (hfq)
   03036 Chromosome and associated proteins [BR:cmet03036]
    K6K41_00535 (hfq)
Messenger RNA biogenesis [BR:cmet03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     K6K41_00535 (hfq)
Chromosome and associated proteins [BR:cmet03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    K6K41_00535 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 AcMNPV_AC11
Other DBs
NCBI-ProteinID: QZO00321
UniProt: A0A9E6RFH8
LinkDB
Position
complement(117059..117331)
AA seq 90 aa
MAAERAQNLQDTFLNNVRKNKVPLTIFLVNGVKLQGVVTWFDNFCVLLRRDGHSQLVYKH
AISTVMPGHPIQLFEPEEAEGDIVPSRGGR
NT seq 273 nt   +upstreamnt  +downstreamnt
atggccgctgagcgcgcacagaaccttcaagacacctttctcaacaatgtccgcaagaac
aaggtcccgctgacgatcttcctggtgaacggcgtcaagctgcagggcgtggtcacctgg
ttcgacaatttctgcgtgttgctgcgccgcgacgggcactcgcaactcgtgtacaagcac
gccatatcgacggtgatgccgggacacccgatccagctcttcgagcccgaagaggcggaa
ggggacatcgtcccgtcgcgcggcgggcggtga

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