Chenggangzhangella methanolivorans: K6K41_14445
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Entry
K6K41_14445 CDS
T07462
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
cmet
Chenggangzhangella methanolivorans
Brite
KEGG Orthology (KO) [BR:
cmet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmet03019
]
K6K41_14445 (hrpB)
Enzymes [BR:
cmet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
K6K41_14445 (hrpB)
Messenger RNA biogenesis [BR:
cmet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K6K41_14445 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
CON_HrpB
HA2_N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QZN98323
UniProt:
A0A9E6ULL0
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All DBs
Position
2895962..2898433
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AA seq
823 aa
AA seq
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MVEAAAALPVDEALPGLMAALAAGPSAVVVAPPGAGKTTRVPLALLSAPWRGDGKILVLE
PRRLAARGAAARMAQTLGESVGETVGLRVRLGSKVSARTRIEVVTDGVFARMIVDDPELA
GVAAVLFDEFHERSLDADLGLALALDAQSGLREDLRVLVMSATLDGARVARLLGPSAQVI
ESQGRAFPVETRHLPRDPRARVEDATASAIRRALAEETGSVLAFLPGRAEIRRTAERLEG
LAGSVEVVELHGGLDPRQQDRAVAPAEPGARKVVLATSIAETSLTIQGVRIVVDCGLARV
PRHEASLGITRLETARASRAAVDQRRGRAGRTEPGVCYRLWEEAATASLPPFAEPEILAS
DLGSFLLDLAAWGVSDPATLAFLDPPPASALAEARASLASLGALDADGRLTERGEKIRSI
ALPPRLAGMLLDAVPEGDGPLAAAVALLAVERGLGGDGPDLGRRLDRFLRERGPRAEDAR
RLSETWLRAAGGKPGAIDVSRAGLVAAKGFPDRIAKARGGRPGQFLLANGRGAALDETEA
LAREPFLAVLDLTGVAQQGRILLAAALTEAEAVEAAGDGVQSREEVEFDEAVAAVRGRAR
RKLGAITLGERPLTVKPSPETAAALAEGLARRGIDRLPWSDAARALRARVGFLANAEPDG
GWPDLSDEALSANAAEWLAPFIGDATALRDVGADDLGNALSALVPYDLRRRLDAEAPSHF
EAPTGSTVPIDYAGEDAPAIEIRVQELFGLARHPSIAGGRLPLTLRLTSPARRPIQVTRD
LPGFWAGSWRDVRAEMRGRYPRHPWPEDPANAAPTTRAKPRGT
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggttgaggccgcggcggccctgccggtcgacgaggcgctcccgggcctgatggcggcg
ctcgccgcggggccctcggcggtggtcgtcgcgccgcccggcgcgggcaagacgacgcgg
gttccgctcgcgctgctttccgctccctggcggggcgacggcaagatcctcgtgctggag
ccgcgccggctcgcggcccgcggggcggcggcgcgcatggcgcaaacccttggggagtca
gtcggggagacggtcggccttcgggtccggctcggctcgaaggtttcggcgaggacccgg
atcgaggtcgtcaccgacggcgtcttcgcccgcatgatcgtcgacgacccggagcttgcg
ggggtcgccgcggtgctgttcgacgagttccacgagcgctcgttggacgccgatctcggc
ctcgcgctcgcgctcgacgcgcaatccggactgcgcgaggatcttcgcgtgcttgtgatg
tccgcgaccctcgacggcgcgcgcgtcgcgcggctgctcggaccgtcggctcaggtgatc
gaaagccagggccgcgcctttccggtcgagacccgccaccttccccgcgatccgcgcgca
agggtcgaggacgcgacggcctcggcgatccgccgcgcgctcgccgaggagacgggaagc
gttctcgccttcctgccgggccgcgccgagatccgccgcacggccgagcggctggagggg
ctcgccggatccgtcgaggtcgtcgagcttcatggcgggctcgatccgcgccagcaggac
cgcgccgtcgcgccggccgagcccggcgcccgcaaggtcgtgctcgcgacctcgatcgcc
gagacctcgctcacgatccagggcgtgcgcatcgtcgtcgactgcgggctcgcgcgcgtg
ccccgccacgaggcgtcgctcgggatcacgcggctcgagaccgcccgcgcctcccgcgcc
gccgtcgatcagcgccgcggccgcgcggggcgcaccgagcccggcgtctgctaccgcctc
tgggaagaggccgcgaccgccagcctgcctcctttcgccgagcccgagatcctggcctcc
gacctcggctccttcctgctcgacctcgcggcctggggcgtctcggaccccgcgacgctc
gcttttctcgatccgccgccggcgtcggctctcgccgaggcgcgcgcctcgctcgcctcg
ctcggcgcgctcgacgccgacggacggctgacggagcgcggcgagaaaatccgctcgatc
gccctgccgccgcggctcgccggcatgctgctcgacgccgttccggagggcgacggaccg
ctcgcggccgccgtggcgctgctcgccgtcgagcgcggcctcgggggcgatggtcccgac
ctcggccgccggctcgaccgcttcttgcgcgaacgcggcccaagagccgaggacgcgcgg
cgcctctccgaaacatggcttcgcgccgccggcggaaagcccggcgcgatcgacgtctct
cgcgcaggcctggtggcggcgaaaggctttccggaccggatcgccaaggcgcgcggcggg
cgtccggggcagttcctgctcgccaacggccgcggcgcggcgctcgatgaaacggaagcg
ctcgcgcgcgagccgttcctcgccgtgcttgatctcaccggcgtcgcgcagcaggggcgc
atcctcctcgcggcggcgctgaccgaggcggaggcggtggaggccgccggcgacggcgtc
cagtcgcgcgaggaggtcgagttcgacgaggccgtggccgccgtccgtggacgggcgcgg
cgcaagctcggcgcgatcacgctcggcgagcggccgctgacggtgaagccgtcgcccgag
accgcggcggcgctggcggagggcctcgcccggcgcgggatcgaccgcctgccctggagc
gacgccgcgcgggcgctgcgggcccgcgtcgggttcctcgcgaacgccgagcccgacggc
ggctggccggacctttccgatgaagcgctgtcggcgaacgccgccgagtggctggcgccg
ttcatcggcgacgcgacggcgctccgcgacgtcggagccgacgacctcggaaacgcgctg
tcggcgctcgtgccttacgatctccgtcgccgtctcgacgccgaggcgccgagccacttt
gaagcgccgaccggctccaccgtcccgatcgactatgcgggcgaggacgcgcccgcgatc
gagatccgggtgcaggagctgttcggtcttgcgcgccatccgtccatcgcgggcggccgc
ctgccgctgacgctgcggctgacctcgccggcgcgccggcccatccaggtgacgcgcgac
ctgccgggcttctgggccggctcctggcgcgacgtgcgcgccgagatgcgcgggcgctat
ccgaggcatccatggcccgaggatccggcgaacgcggcgcccacgacgcgagcgaagccg
cgcgggacgtga
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