Corynebacterium macginleyi: GWO64_002005
Help
Entry
GWO64_002005 CDS
T08010
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cmf
Corynebacterium macginleyi
Pathway
cmf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GWO64_002005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmf03021
]
GWO64_002005
03400 DNA repair and recombination proteins [BR:
cmf03400
]
GWO64_002005
Enzymes [BR:
cmf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GWO64_002005
Transcription machinery [BR:
cmf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GWO64_002005
DNA repair and recombination proteins [BR:
cmf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GWO64_002005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF6801
Motif
Other DBs
NCBI-ProteinID:
QRJ58203
LinkDB
All DBs
Position
377435..381430
Genome browser
AA seq
1331 aa
AA seq
DB search
MFDVNLFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDQSTLEAEMLLEKKDVEDDTESEIAERASKLESD
LAELEAAGARADARKKVQNAADKEMQHIRERGEREIARLDEIWNTFLKLAPKQMIIDETI
YEELVDRYEDYFTGGMGAEAIQTLVRNFDLEAEAEELREIINNGKGQKKMRALKRLKVVA
AFLNSGNDPAGMVLDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVSGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEQAISEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYYLTMDKAENEIGGN
GRFCEASDDYPATGVYSSYAEALMAYDRGTVGLQAPIKVRIDHLRPPADIEEELFPDGWS
KGQAWLGYTTIGRIMFNELLPWNYPYLEGIMVRKGGGSNGKVLIGDVVNDLAAKYPMITV
AQVLDNMKDAGFYWATRSGVTITMSDVLVLPNKTEILESYEKEAERIERKYWEQGALTER
ERYDRLVELWKDATDTVGEAVESIYPDYNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSH
GDYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRE
EDCGTRQGVRVPIGEISGDKIVFSELWETSASGRVLAIDAKDEKGEVVAEAGSDLTEELT
QKLLDAKVTEVKVRSVLTCQTPAGVCAKCYGKSMASGQLVDIGEAVGIVAAQSIGEPGTQ
LTMRTFHQGGVGGDITGGLPRVQELFEARNPKNRAPIASVDGTVSLSDEGNFWTLTITPD
DGSDDVVYEKLSKRQGLAQVRRPMESNPNAMIERSLKDGDHVETGDRLMRGAADPHDVLE
VLGRRGVEQHLINEVQAVYRTQGVAIHDKHIEIIIRQMLRRGTVIDAGTTELLPGNLIDL
SEAKQMNAAQVAEGGEPAQLRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSD
KLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDGFGEFTG
ASVPLDEDFTF
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacgtaaatctcttcgacgagctccgcatcggtctagccactgccgacgatatc
cgtcgctggtctaagggcgaggttaaaaagcccgagaccattaactaccgcacgctgaag
ccggaaaaggacggcctgttctgcgagcgcattttcggacccacccgcgactgggagtgc
gcttgtggtaagtacaagcgcgtccgctacaagggcattatctgtgagcgctgcggtgtt
gaggtcaccaagtccaaggtgcgccgtgagcgcatgggccacatcgagctggctgctccg
gtaacgcacatttggtatttcaagggtgttccttcccgcttgggctacctgctggacctg
gccccgaaggaccttgagcgcatcatctacttcgctgccaacatcatcacctccgttgat
gaagaggctcgccacaacgatcagtccactctggaagcagaaatgttgctggagaaaaag
gacgttgaagatgataccgagtccgagattgctgaacgcgcttccaagctggaatccgac
ttggcggagctggaggcagccggtgcgcgggcagatgcccgcaagaaagtccagaacgct
gccgataaagaaatgcagcacattcgcgagcgtggcgagcgcgaaatcgcacgcctggat
gaaatctggaacaccttcctgaaacttgctccgaagcagatgatcattgatgagaccatc
tatgaagagctggttgatcgctacgaggattacttcactggcggcatgggtgcagaagcc
attcagacgttggtgcggaacttcgacctcgaggcagaggctgaggagctgcgtgagatt
atcaacaacggcaagggccagaagaagatgcgtgcgctcaagcgcctcaaggttgttgct
gccttcctaaattccggcaacgacccggcaggtatggtgctagacgctattccggttatt
ccgcctgagctgcgcccgatggtccagttggatggtggccgcttcgccacctcggacctg
aatgacttgtaccgccgcgttattaaccgcaataaccgcctgaagcgcatgatcgacttg
ggtgcaccagagatcatcgtgaacaacgagaagcgcatgctgcaggaatctgtggacgcg
ctcttcgataacggccgccgtggccggccggttagcgggccgggcaaccgcccgttgaag
tctctgtctgacttgctcaagggtaagcagggtcgtttccgtcagaacctgttgggtaag
cgtgttgactactctggtcgttctgttattatcgtcggcccgcagctgaagctgcacgag
tgtggtctgccgaagctgatggcgctcgagctgttcaagcctttcgtcatgaagcggttg
gttgaaaacgattacgctcagaacattaagtccgcaaagcgcatggtggagcgccagcgc
ccagaggtttgggacgtactggagcaggccatttctgagcaccctgtgatgctcaaccgt
gcgcctacgctgcaccgcttgggtattcaggccttcgagccgaagctggttgaaggtaaa
gcgattcagctgcacccgttggcctgcgaggccttcaacgccgacttcgacggtgaccag
atggcagttcaccttcctctgtccgcagaggcgcaggctgaggcccgcgtgttgatgctg
gcttccaataacatcctgtccccggcatccggtaagcccctggctatgccgcgtctggac
atggtgaccggcctgtactacctcaccatggataaggcagaaaatgagatcgggggcaac
ggtcgcttctgcgaggctagcgatgattacccggcaactggggtgtactcgtcttacgct
gaggctctgatggcctacgaccgcggtacggtagggctgcaggcaccgattaaggtccgt
atcgatcatttgcgcccgccagcggacattgaggaagagcttttccccgatggctggtcc
aagggtcaggcatggttgggctacacgaccatcggacgcatcatgttcaacgagctgctg
ccctggaactacccttacctagagggcatcatggtccgcaagggcggcggctcaaacggc
aaggtgctcattggtgacgtggtcaatgacttggccgccaagtacccaatgattaccgtg
gcccaggttttggataacatgaaggacgctggcttctactgggcaacccgttcgggtgta
accattacgatgtctgacgtgctcgtgctgccgaataagaccgagatactcgagtcttat
gagaaggaagcagaacgcattgagcggaagtattgggagcagggtgctctgacggagcgc
gagcgctatgatcgcttggttgaactgtggaaggacgctactgacaccgtcggtgaggcc
gtagagagcatctacccggattacaacccgattccgatgattgtgaagtcgggtgcggcc
ggtaacatgcgtcagatctggacgttggccggtatgaagggcatggtcgtgaactcgcac
ggtgattacatcacccgtccgattaaaacctccttccgcgaaggcctgtccgtgctggag
tacttcaacaactcccacggttctcgtaagggtctggccgataccgcgctgcgtaccgct
gactccggttacctcacccgtcgcctggtggacgtcgcgcaagacgttattgttcgcgaa
gaagactgcggcacccgccagggcgtgcgcgttcctatcggcgagatctccggtgacaaa
atcgtcttttccgagctatgggagacctctgcttccggtcgcgtgctcgccattgatgcc
aaggacgagaagggcgaggtcgtcgcagaagctggttccgatctgaccgaggagcttacg
cagaagcttctcgatgccaaggtcaccgaggtcaaggtccgctccgtgctgacctgccag
accccggccggtgtctgtgctaagtgctatggcaagtctatggcatctggccagttggtc
gatatcggtgaggccgttggcattgtggctgcacagtccattggtgagcctggtacccag
ctcacgatgcgtaccttccaccagggtggtgtcggtggcgacattaccggtggtctgccg
cgtgtccaggagctcttcgaggcccgtaatccgaagaatcgcgcaccgattgcctccgtc
gatggcaccgtgtccctctccgatgagggtaacttctggacgttgaccatcaccccagat
gacgggtctgatgacgttgtctatgagaagctctctaagcgccagggactggcccaggtg
cgtcgcccgatggagtccaacccgaatgcgatgatcgagcgttctttgaaagacggtgat
cacgttgagaccggtgaccgtttgatgcgtggtgcagctgacccccacgacgtgctagag
gttctgggccgccgtggcgtggagcagcacctcatcaacgaggtgcaggccgtctaccgc
acccagggtgtggccatccacgacaagcacatcgagatcatcatccgccagatgctgcgc
cgtggtaccgtcatcgacgccggtaccacggagctgctgccgggtaacctgatagacctt
tctgaggccaagcagatgaatgctgctcaggttgcagaaggcggcgagccagcgcagctg
cgctctgagataatgggtattaccaaggcctctttggctaccgagtcctggctgtccgcc
gcttcgttccaggagaccacgcgtgtgcttacggatgccgctattaacaagcgctccgat
aagctcatcggtctcaaggagaacgtcatcatcggtaagctgatcccggccggtactggt
atctcccgttaccgcaatatctccgtcaagccaaccgaggctgcgcgcaacgccgcatac
tcgattccgacttacggcgattccatctacggcgacgatggcttcggtgaattcaccggc
gcttccgtcccgctggatgaggacttcaccttctaa
DBGET
integrated database retrieval system
