Corynebacterium macginleyi: GWO64_004985
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Entry
GWO64_004985 CDS
T08010
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cmf
Corynebacterium macginleyi
Pathway
cmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GWO64_004985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmf03019
]
GWO64_004985
Messenger RNA biogenesis [BR:
cmf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GWO64_004985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Motif
Other DBs
NCBI-ProteinID:
QRJ58719
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Position
990037..992175
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AA seq
712 aa
AA seq
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MTEPRNRSRKVTRKAGPPSETETASNEAASPVFQAPANNSGDAGKEKQGSSGQNNSADNN
NEGAHNDRRSRSRGGRGRGRGGNGNKGNGQGGANQGGNNKNTNGGNGKNGNGKGRSGNNR
GRRNVPKSMQGADLTKRLPEPPKQPKDALRIYALGGISEIGRNMTVFEYGNELLIIDCGV
LFPSSGEPGVDLILPDFGPIEKKIDKVKALVVTHAHEDHIGAIPWLLKLRPDIPIVASRF
TIALIAAKCKEHRQKPKFIEVNEKSDVTYGCFRVRFWAVNHSVPDALGIMLGTPAGNIIH
TGDIKLDQTPLDNRPTDLPALSRYGDEGVDLMLCDSTNATVPGVSASEGDIPANFKRLVA
SAPQRVILASFASNVYRVQAAIDAAVANGRKVAFNGRSMIRNMEIAEKMGFLKVPRGTII
PIDEAAKMAPHKTMLITTGTQGEPMAALSRMARREHRQITVRDGDTIIFSSSLIPGNEEA
VFGVINMLSQIGANVITNQDVKVHASGHGYSGELLFLYNAARPRNAMPVHGEWRHLRANK
ELAISTGVARDRTVLAQNGVVVDLRKGRAEVVGQLQVGHLYVDGVSMGDVDDDTLADRTN
LGAGGVVSITCVIDNRTSRLLEHPTVATTGFSDDDRGVVPEVAEMVENTMNDLAAEGEND
TYRMVQKLRRKVSKLMDSKYKREPVILPTIVPTNSGILLADDADVDASRESL
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaccccgtaatcgttcccgtaaggttacccgcaaggcgggtccaccgtcggaa
actgagaccgcctccaatgaggcggcttcgcccgtatttcaggcccctgccaataactcc
ggtgacgccggtaaggagaagcagggcagctctggacagaacaactctgccgataataac
aacgaaggtgctcacaacgatcgccgctcgcgttcccgcggcggccgtggccgtggccgt
ggcggaaacggcaataagggcaatggccagggtggcgctaaccagggcggcaacaataag
aacaccaacggtggcaacggaaagaatggcaacggcaagggtcgtagcggcaataaccgc
ggccgccgcaatgtgccgaagtcgatgcagggggcggatttgaccaagcgcttgccagaa
ccgccgaagcagccgaaagatgctctgcgcatctacgctctgggtggtatttctgagatc
ggccgcaacatgacggtattcgagtacggtaacgagctgctcatcattgattgtggcgtg
cttttcccgtcctccggcgagcctggcgtggatctcatcctgccggacttcggaccgatt
gagaagaagatcgacaaggtcaaggccctcgtggttacccacgcccacgaagaccacatc
ggcgctatcccatggctgttgaagctgcgcccagatattcccattgtggcctctcgtttc
accatcgcgcttattgcggcgaagtgtaaggaacaccgtcagaagccgaagttcattgag
gtcaacgagaagtccgacgtgacttacggctgcttccgggttcgcttctgggcggtcaac
cattccgtgcctgatgcgcttggcattatgctgggcaccccggccggcaatatcattcac
accggtgatatcaagctggatcaaaccccgttagataaccgtccgactgaccttccggcg
ttgtctcgatatggcgacgagggcgtcgacctcatgctgtgcgattccaccaacgccacc
gtgccgggcgtatccgcttccgagggagatattccggcaaacttcaagcgcctggtggca
agcgcaccgcagcgcgtcatcctagcttccttcgcctcgaacgtttaccgagttcaggcc
gccatcgatgctgccgtggccaacggccgcaaggttgccttcaatggccgttcgatgata
cgaaatatggaaattgcggaaaagatgggctttttgaaggtcccgcgcggtaccatcatc
cccatcgatgaggctgcaaagatggctccgcacaagaccatgctcattactaccggtaca
cagggtgagccgatggcagcgttgtctcgcatggcacgccgcgaacaccggcagattacg
gtgcgcgatggcgataccattatcttctcctcctcgctcattccaggcaatgaggaggcc
gtcttcggcgtgatcaacatgctgtcccagatcggtgcgaatgtaatcaccaaccaggac
gtcaaggtccacgcttctggccacggctactctggcgagctgctcttcctctacaacgcg
gcgcgaccccgcaatgctatgccggtccacggcgagtggcgccacctgcgcgccaataaa
gaattggcgatttccaccggcgtggcccgcgaccggacggtcttggcgcaaaacggagtc
gtggtcgatttgcgcaagggtcgcgcagaggtcgtcggtcagctgcaggtcggccacctc
tacgtcgatggcgtgtccatgggcgatgtcgatgatgatactttggcggaccgcactaac
ctgggcgcaggtggcgtggtatccatcacctgcgtgatcgataaccgtacctcccgcctg
ctggagcaccccaccgtggcgaccacgggcttctccgatgatgaccgcggcgtggtgcct
gaggttgcggaaatggtggaaaataccatgaatgatctcgccgcggaaggcgagaatgac
acctaccggatggtgcaaaagctacggcgcaaggtctccaagctcatggattccaagtac
aagcgcgagccggtcatcttgcctaccatcgtgccgacgaattccggtatcctgcttgcg
gatgacgccgatgtcgatgccagccgtgagtcgctgtaa
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