Corynebacterium macginleyi: GWO64_007470
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Entry
GWO64_007470 CDS
T08010
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cmf
Corynebacterium macginleyi
Pathway
cmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GWO64_007470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmf03019
]
GWO64_007470
03009 Ribosome biogenesis [BR:
cmf03009
]
GWO64_007470
Enzymes [BR:
cmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GWO64_007470
Messenger RNA biogenesis [BR:
cmf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GWO64_007470
Ribosome biogenesis [BR:
cmf03009
]
Prokaryotic type
rRNA helicases
GWO64_007470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
ResIII
CMS1
Cj1289-like_C
AAA_22
UvrA_inter
Cas3-like_C_2
DUF2884
Phage_NinH
adh_short
Motif
Other DBs
NCBI-ProteinID:
QRJ57125
LinkDB
All DBs
Position
complement(1521294..1523162)
Genome browser
AA seq
622 aa
AA seq
DB search
MSITDNATGGVNEPEDVKKSESQDNSQGVNKETRAANTSEGTGAESQDSANDDSQGFEHL
DLPDKILQAVAKVGFTKPSPIQKETIPILMAGRDVVGLAQTGTGKTAAFALPVLSQLDPQ
ARHPQALVLAPTRELALQVADAFQSFAETLKDIEVLPIYGGQAYGIQLSGLRRGAQVIVG
TPGRVIDHLEKGSLDLSQLQFLVLDEADEMLNMGFQEDVERILESTPDRKQVALFSATMP
NAIRRLSKQYLHNPAEVTVKSERRTNDNIKQRFLLIPHRAKMDAFTRILEVTTYDAIIVF
CRTKHETEEVAEALRDRGYSAGAINGDIAQAQRERTVDQLKDGRLDILVATDVAARGLDV
ERITHVVNFDIPNDTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSIERVTNARLEEM
DLPSVDEVNEKRKEKFAQAITQAMDNKQADLFRNLVRKYSEDNNVAMDDIAAALAVMHQG
GKKFLLEDKPLPKPKKERRDRDDRKRDRDFRGGGKSRGGSRRSDGDFETYRLDVGKRQNV
RPGAIVGAIANEGGLSAKDFGRITIAVGHTLVDLPKNMDPAVLERLKDTRISGQLIKIQK
DTGRPPRRDGGGRRKHGGRFHD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaccgataacgccaccggcggcgtaaacgagccggaagatgttaaaaagtcg
gaatctcaggacaactcgcaaggtgtcaataaggagaccagggctgcgaatacttctgag
ggtaccggcgctgagtctcaggactcggccaacgacgactcccaggggttcgagcacctc
gacctgccagataaaattctgcaagccgttgcgaaggtaggctttacgaagccgtccccc
atccaaaaagaaaccatccctatcctgatggcaggccgcgatgtcgtgggcctggcgcag
accggtaccggaaaaaccgctgcctttgcgctgccggttttgtcccagcttgacccgcag
gcacgccacccgcaggcacttgttcttgcgcctacccgcgagctggctctgcaggttgca
gatgccttccagtccttcgcggaaaccctgaaagacatcgaagttcttcctatctacggt
ggccaggcttatggcatccagctgtctggtctgcgccgtggtgcccaggtcatcgtgggt
acccccggccgcgtcatcgaccatctggaaaagggctcgctcgatctgtcccaactgcag
ttcctcgtcctcgatgaagccgatgagatgctgaacatgggcttccaggaagacgtcgag
cgcatcctggaaagcaccccggaccgcaagcaggtggcgcttttctcagccaccatgccc
aacgcgatccgccgcctgtccaagcaatacctgcacaacccggcggaagtaaccgttaag
tccgagcgccgcaccaacgacaacattaagcagcgctttctcttgattccgcaccgcgca
aagatggatgctttcactcgcatcctcgaggtcaccacctacgacgccattatcgtcttc
tgtcgcaccaagcatgagaccgaagaggtggccgaggcactgcgcgatcgcggttatagt
gctggtgccattaatggtgacatcgcccaggcgcagcgcgagcgtaccgttgaccaacta
aaggatggtcgcctcgacatcctcgtggctactgacgtggccgcgcgtggccttgatgtc
gagcgcatcacccatgtggtgaacttcgatattccgaacgataccgagtcttacgtgcac
cgcatcggccgtactggccgtgcggggcgctccggcgaggcaattttgttcgtcacgccg
cgcgagcgccgcatgctgcgctccatcgagcgtgtgaccaacgcacgcctcgaagagatg
gacctgccgtctgtcgatgaggtcaatgagaagcgcaaggaaaagtttgcgcaggccatt
actcaagccatggacaacaagcaggctgatttattccgcaatttggtgcgcaagtattcg
gaagacaacaatgttgcgatggatgacatcgccgctgcattggccgtcatgcaccagggt
ggcaagaaattcctgttggaagacaagcctctgcccaagccgaagaaggaacgccgcgat
cgcgatgaccgcaagcgtgaccgcgacttccggggtggcggcaagagccgcggcggctcc
cggcgctcggatggtgactttgagacgtaccggttggacgtcggcaaacgccagaatgtc
cgtcccggtgccattgtcggtgcaatcgccaacgaaggtggcttgtctgctaaggacttt
ggtcgcatcaccattgcggtgggtcacacccttgtggatctgccgaagaacatggacccg
gcggtgttggagcgtctgaaggacaccaggatttctggtcaacttattaagatccagaag
gatactggtcgcccgcctcgccgtgatggtggcggtcgccgcaaacacggtggtaggttc
cacgactaa
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