Corynebacterium macginleyi: GWO64_008910
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Entry
GWO64_008910 CDS
T08010
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cmf
Corynebacterium macginleyi
Pathway
cmf03420
Nucleotide excision repair
cmf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GWO64_008910
03430 Mismatch repair
GWO64_008910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmf03400
]
GWO64_008910
Enzymes [BR:
cmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GWO64_008910
DNA repair and recombination proteins [BR:
cmf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GWO64_008910
MMR (mismatch excision repair)
Other MMR factors
GWO64_008910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
QRJ57372
LinkDB
All DBs
Position
complement(1819905..1823084)
Genome browser
AA seq
1059 aa
AA seq
DB search
MSKQNFSPEEIAQALGKDYPPTKEQAHVIKGSFGPKLVVAGAGAGKTETMASRVVYLVAN
GYVRPEEVLGLTFTRKAAQQLEQRIRRQLIQLRDSGLIVPGSPAAEALNNIAPTVATYDS
YAGELVREYGLLVPVEPSARIITEAERFAIAYDVVKNYGGQLSDEKTLGSITETLLKITS
DMDNSLKDPDDIAEFARDFRADIDNLEKAPRTKGEYSKDLQKYINVQDLRVQYVPLIEEL
KRAQAEQQVITFGEQMSVAARLAQEHPAVGKQQAQRYRVIMLDEYQDTSYAQRVLLRSLF
GGEQKDISVTAVGDPMQAIYGWRGATSENLTAFVEDFPQADGTHAPKDQLTTSWRNPSGA
LELANSVAAGVFAGGPRPVDELHAAPHKGEGEIELAYFASEDKEHEFIARKLRQQWDARE
GDGFSAAVLVRTNRQTAAIAAALDAVDVPNEINGLGGLLWQPEIQDLVALATMLVRPEDA
QAALRIFAGPMCGLGMGDIQALAARQKNLAGAKQERLQWEEGMDPEQYLRAQLAQLTAEA
PDQMVGLADALADLGERDRYTPQGLARMEEVSAKLRYLRTYSLPKPLSDLFADIEAIFNI
RTEVLARGSAGGATHLDKFADIVAGFHGDSLYALLDYLKLAREHEDGLELGEVPASTDRV
QIMTVHKAKGLEWEHVYVVHADSSSYKAQAETFLSKIEKVPGEDDYIEVSPDAVTRSEFE
KACKAFVDDDRAHNAEEAARLFYVALTRTESTLTVTGSGTNNLSGKAKKGPYEYLERLKE
SFPQYVVEWTVPEKPVETSANAAESGLFPALEADPDALAGAEAVLSAMENLPELSHGETF
ELWEQDAGALIEEYKSLQQPVVDVELPSELTASDMVALGSDPLQFARRQRRPVPFKPNSY
AKRGTAFHAWLEERFGSPVLLGEEELPGINEPEDFDLEELKESFLNSEWAERQPDFVEAP
FEITIGSAVVRGRMDAVFRLADGTWMVVDWKTGRPPKGAAMEAAKIQLAVYAEAWRRIHG
GDKIRAAFHYVHDGYTFEPDTLARGEELRSLLESSVTGP
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcagaatttttccccggaagaaatagcccaagcactgggcaaggattaccca
cccactaaggaacaagcccacgtcatcaagggttcctttggccccaagctggtggtggcc
ggcgccggtgccggtaagacggaaacgatggcttcccgcgtggtctatttggtggccaat
ggctacgtgcgcccagaagaggtattggggctaacctttacgcgcaaggcagcacagcaa
ctagaacagcgtattcggcgccagctcattcagctgcgcgattccgggctcatcgtcccc
ggcagccccgccgcggaggcacttaacaatatcgcacccaccgtggccacctatgactct
tatgccggagagctcgtgcgcgaatacggccttttggtgccggtggagccctcggcgcga
atcatcacggaggcagagcgcttcgccatcgcctatgacgtggtgaaaaactacggcgga
cagttatcggatgaaaagaccttaggttccatcacggaaaccctgctcaagatcacctcc
gatatggacaattccttgaaggatccggatgatatcgccgagttcgcacgcgatttccgc
gccgatatagacaacctggaaaaggcgccgaggaccaagggcgagtattccaaggacctg
cagaagtacatcaatgtccaggatctacgcgtgcagtacgtgcctttgatcgaggaactc
aagcgtgcgcaggcagagcagcaggtcatcacctttggcgagcagatgtctgtagcagcg
cgtctcgcgcaagaacacccggcggtgggcaagcaacaggcgcagcgctaccgcgtgatc
atgttggatgaatatcaagatacgtcttatgcccagcgcgtgctgctgcgtagcctcttt
ggtggggagcagaaagacatttccgtgaccgcggtgggcgatcccatgcaggccatctat
ggctggcgtggtgctacctcagaaaacctcaccgcattcgtggaggatttcccgcaggca
gatggcacccatgctcccaaggatcagctcactacctcgtggcgcaacccgtcgggtgcc
ttggagctggctaactcggtggcggccggggtctttgcgggcggtccgcgccccgtcgat
gagctgcatgcggccccgcacaagggcgaaggtgagattgagctcgcctatttcgccagc
gaggacaaggaacacgagtttattgcccggaaactaaggcagcagtgggatgcacgcgag
ggagatggctttagcgcagcggtattggtgcgcaccaaccggcaaaccgcagccatcgca
gcagccttggatgcagtcgatgttcccaatgaaattaatggcttgggtggattgctgtgg
cagccggaaatccaggacctcgtagcgctggcaaccatgttggtgcggccggaggatgcg
caagcggccctccgcattttcgcggggcccatgtgcgggctgggcatgggcgatatccaa
gcccttgccgcgcggcaaaagaatttggcgggggcgaagcaagagcgcctgcaatgggaa
gagggcatggatccagagcagtatctgcgcgctcaattggcgcagcttacggccgaggcg
cctgatcagatggtggggcttgctgatgccctggcagacctcggcgagcgcgatcgctac
accccgcagggcttggcgcgtatggaagaggtatccgccaagctgcgctacctgcgcacc
tactcgctgcctaagcctttaagcgatcttttcgcagacatcgaggccatttttaatatc
cgtaccgaggtccttgcccgcggcagcgcgggaggtgccacccacctggataaattcgcc
gatatcgtcgcggggttccacggggattccttgtatgcgctcctcgattatttgaagctc
gctcgcgaacatgaagatggccttgagcttggggaggtgcctgcctccacggatcgcgta
caaatcatgaccgtgcataaggccaagggcttggagtgggagcacgtctatgttgtgcac
gcggattcttcgagctataaggcacaagctgagacctttttgtccaagattgaaaaggta
cccggtgaagatgactacatcgaggtatcaccggatgcggttacccgctccgaattcgaa
aaggcctgcaaggcattcgtagatgatgaccgcgcgcacaatgcggaggaggcagcccgc
ctcttttatgtggccctgaccagaacggagtccacattgaccgttaccggctccggtact
aataacctttcgggcaaggccaagaagggcccgtatgaatacctcgaaaggctaaaagaa
tccttcccccaatacgtagtggagtggacggtgcccgaaaaaccggtggaaacctcggcc
aatgcggcagaaagcgggctctttccggcccttgaagcagatccggatgccctggccggc
gcggaggcggtgctgtctgccatggagaaccttcctgagctgagccacggcgagaccttc
gaattgtgggaacaggatgcgggcgctctcattgaggaatacaaatccttgcagcaaccg
gtagtggatgtggaacttcccagcgagcttaccgcttctgacatggtggctctgggcagc
gacccactgcagtttgcacgcaggcaacgccgcccggtgccgtttaagcccaattcctat
gccaagcggggcaccgccttccacgcttggctggaagagcgctttggcagtccagtgctg
ctaggggaagaggaattgccgggcatcaatgagccggaggacttcgacctggaagagctc
aaggaatccttcctgaactccgaatgggcggagcgccagccggactttgtggaggcgccg
tttgaaatcactatcggcagcgcggtggtgcgcgggcgaatggatgccgttttccgcttg
gcagatggcacgtggatggtggtggactggaagactggccggccaccgaagggagcggcc
atggaagcagcgaagatccaattggcggtgtacgccgaagcctggcggcgcatccacggc
ggcgataaaatacgtgcggctttccactacgttcacgatggctatacgtttgagccagat
actttagcccgtggtgaggagctgcgtagcctgcttgaatcgtcagtaacgggcccttag
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