Chlamydia muridarum Nigg3 clone G28.38.1: NC81_03940
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Entry
NC81_03940 CDS
T03405
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cmg
Chlamydia muridarum Nigg3 clone G28.38.1
Pathway
cmg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NC81_03940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmg03021
]
NC81_03940
03019 Messenger RNA biogenesis [BR:
cmg03019
]
NC81_03940
Transcription machinery [BR:
cmg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NC81_03940
Messenger RNA biogenesis [BR:
cmg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NC81_03940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
S1CSD-TOTE-2
AAA_22
OB_RNB
Mor
AAA
NACHT
DUF5855
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AIT91820
UniProt:
A0A097KIC0
LinkDB
All DBs
Position
complement(919010..920404)
Genome browser
AA seq
464 aa
AA seq
DB search
MKEESPAEVLHKVKEHKRREGPLPLGKEGSEDSAVATEEKEAPRPVAVTKIAKLQRMGIN
ELNVLARQYGVKNVGSLTKSQVVFEIVKAKSERPDEFLIGEGVLEVLPDGFGFLRSPTYN
YLPSAEDIYVSPAQIRRFDLKKGDTIVGTIRSPKEKEKYFALLKVDKINGSTPDKAKERV
LFENLTPLHPNERLIMEMGKENLAERVLDLTAPIGKGQRGLIVAPPRSGKTVILQSIAHA
IAVNNPDAELIVLLIDERPEEVTDMIRQVRGEVVASTFDEQPDRHIQVAEMVIEKARRLV
EHGKDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAARNIEGGGSLT
ILATALIDTGSRMDEVIFEEFKGTGNMELVLDRHLSDRRIYPAIDLIKSGTRKEELLYHP
GELEKVRLFRQAIAGLTAIDAMQLLLGRLKKTNSNTEFLLSLKD
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagaaagtccagccgaggtcttacacaaggtaaaggagcataagaggcgcgag
ggtcctttaccattgggaaaagaaggtagtgaagacagtgctgttgctacagaagagaaa
gaggccccgcggccagtggcagtgacaaagattgctaaactacaacgcatgggcattaat
gagctgaatgttttagcgcggcaatatggggtgaagaatgtaggttccctgacgaaatcg
caggtagtgttcgaaatcgttaaagctaagtctgaacgtcctgatgagtttttgattggt
gagggagttttagaagttctcccagatggctttgggtttctgagatctcctacatacaac
tatcttccttctgcagaggatatttatgtttctccagcgcagattcgtcgttttgatttg
aagaaaggagatactatcgttggaacgatccgttctcctaaggagaaagagaagtatttt
gctttattgaaagtagataaaatcaacggttcgactcccgataaagcgaaagaaagagtt
ttatttgagaacttaaccccactgcatcctaatgagcggttaatcatggagatggggaaa
gaaaacctggcggagcgtgtattggatttaacagctccaattggtaagggacaacgaggg
ctgattgtggctccgcctcgttccgggaaaacagtgattttgcagagtattgcgcacgcc
attgctgtaaataatcctgatgcagagctcattgtattactgattgatgagcgtcctgaa
gaagttactgatatgattcgtcaggttcgaggtgaagttgttgcatcgacttttgatgaa
cagcctgatcgacatattcaagttgctgaaatggtaattgaaaaggcaagacgtttagtt
gagcacggtaaagatgttgtgattttactagattctattacgcgtttagctcgtgcatat
aacactgtgcaaccacattcaggaaaaatcctcactggaggggtagatgccagtgcctta
cataaacctaagcgtttctttggtgcggctagaaatattgaaggtggtgggtctctaacg
attttagccacagcgttaattgatacggggtcaagaatggatgaggtgatctttgaggaa
ttcaaaggaaccggaaacatggaattagttcttgatcggcacctttctgatcgtagaatt
tatcctgctattgatttgattaagagcggaacacgaaaagaagaattgctataccatcca
ggagagttagagaaagtgcggctgttccggcaggctatagctggcttaacagcaatagat
gcaatgcagttgcttcttggtcggttgaaaaagacaaatagcaacacagagtttctattg
tcattaaaggattaa
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