Chlamydia muridarum Nigg3 clone G28.38.1: NC81_04560
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Entry
NC81_04560 CDS
T03405
Name
(GenBank) RNA polymerase sigma54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
cmg
Chlamydia muridarum Nigg3 clone G28.38.1
Pathway
cmg02020
Two-component system
cmg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cmg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NC81_04560
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NC81_04560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmg03021
]
NC81_04560
Transcription machinery [BR:
cmg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NC81_04560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_36
DUF4363
Motif
Other DBs
NCBI-ProteinID:
AIT91931
UniProt:
A0A070A126
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All DBs
Position
1042098..1043378
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AA seq
426 aa
AA seq
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MLHQHQTASVALCPALHIQQSLDMLQMPVAELSEFLSQQITINPCFDLDALDDLPDTCSF
FPISEHHPFTETLLSHLLHQIEVHFSLPQDRAIAQYIVGNLSPEGLFLEDPSLSASNLGV
SDVLFQKIWLRIQQFHPLGIASSSLQSYWLSLLDPSSHKEALMIIRQHFNRLARCDFAGI
SKKIQLPIAKILVFLRQALASIPWCPAAGFPNSLKTPSPALPDAYLSFSHEKSWEIFMNK
DSLPAIRLNSTVLHIYHTLPRDDKDHLSQQIRAAKQLLRNIKKREETLLAVLRVLIPYQE
EFLLKKRSVPKAFSVKQLARELSLHETTICRAINNKTLATPIGLISMRSLFPQAVGACPD
QSKATILHWIHQWISTEKNPLSDEAISQKIIAKGIPCARRTVAKYRSQLNIPPAHQRKHV
NASLVP
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatcagcatcaaacagcatctgtagctctttgtcctgctttacatattcaacaa
agtttggacatgctacagatgccggttgctgaactctcggaattcttatctcaacaaatc
actatcaatccttgtttcgatctcgatgccctggacgatcttccagacacatgttccttt
ttccctattagtgagcaccatcctttcacagagaccctattatcccatctacttcaccaa
atagaggtacatttttctctccctcaagaccgtgctatagcccaatacatcgtagggaat
ctttctcctgaaggactctttttggaagatccctctctctcggcttcaaatttaggagtt
tctgatgtcctttttcaaaaaatatggctacgcatccaacaatttcatcccctaggaatt
gcctcatcttctcttcaatcctattggctatctttactagatccttcttcgcataaagaa
gctttaatgattatccgacagcactttaatcgattagctcgttgtgattttgccggcatt
tctaagaaaattcagctgcccatagcaaagattcttgtatttcttagacaagctctagct
tccatcccctggtgtccagcagctggatttcctaattcacttaaaactccttctccagcg
cttcctgatgcctatctttctttctcacacgaaaaatcttgggaaatctttatgaacaaa
gattctcttccagctattagacttaatagtacggtgcttcatatttaccacaccctcccc
cgtgatgataaagaccacttatcacaacaaattcgtgctgcaaaacagctgcttcgcaat
ataaaaaaacgtgaagaaactttattagcagtccttcgcgttttaattccttatcaggag
gaattccttcttaaaaaacgttctgttccgaaagctttttcagtaaaacaactagctcgc
gaactctctcttcatgaaaccactatttgtcgggcaatcaataataagacgctcgcaaca
cctatcggattgatttctatgcggtcgctatttccacaagctgttggagcttgtcctgat
caatctaaagctactattttacattggatacatcagtggatatctacagaaaaaaatcct
ctatctgacgaggctattagccaaaaaattattgcgaaaggaattccttgtgcacgccgt
acagtagcaaaatatcggtctcaactaaacatccccccagcgcatcagcgtaaacatgtg
aatgcttctctagtgccataa
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