Chlamydia muridarum Nigg3 clone G28.38.1: NC81_04590
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Entry
NC81_04590 CDS
T03405
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
cmg
Chlamydia muridarum Nigg3 clone G28.38.1
Pathway
cmg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cmg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NC81_04590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmg03021
]
NC81_04590
Transcription machinery [BR:
cmg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NC81_04590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
TatA_B_E
LpqV
DUF3685
Motif
Other DBs
NCBI-ProteinID:
AIT91936
UniProt:
A0A097KIN2
LinkDB
All DBs
Position
complement(1047113..1048828)
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AA seq
571 aa
AA seq
DB search
MRMDTLDSQAADAAQEEEIQRKLEELVTLAKDQGFITYEEINEILPPSFDSPEQIDQVLI
FLAGMDVQVLNQADVERQKERKKEAKELEGLAKRSEGTPDDPVRMYLKEMGTVPLLTREE
EVEISKRIEKAQVQIERIILRFRYSTKEAVSIAQYLINGKERFDKIVSEKEVEDKTHFLN
LLPKLISLLKEEDSYLEERLLALKDPALSKQDQAKLNDELEKCRIRTQAYLRCFHCRHNV
TEDFGEVVFKAYDSFLQLEQQINDLKVRAERNKFAAAKLAAARRKLYKREVAAGRTLEEF
KKDVRMLQRWMDKSQEAKKEMVESNLRLVISIAKKYTNRGLSFLDLIQEGNMGLMKAVEK
FEYRRGYKFSTYATWWIRQAVTRAIADQARTIRIPVHMIETINKVLRGAKKLMMETGKEP
TPEELGEELGFTPDRVREIYKIAQHPISLQAEVGDSGESSFGDFLEDTAVESPAEATGYS
MLKDKMKEVLKTLTDRERFVLIHRFGLLDGRPKTLEEVGSAFNVTRERIRQIEAKALRKM
RHPIRSKQLRAFLDLLEEEKTGSGKIKSYKN
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatggatacgctagatagtcaagctgctgatgcagcccaagaagaagaaatccaa
agaaagttagaagagctagtcactcttgctaaggatcaagggttcatcacgtatgaagaa
attaatgaaattcttcccccttctttcgattcgccagaacagatagatcaagttttaatt
tttctggcggggatggacgttcaagtcttaaaccaagcagacgtagagcggcagaaagaa
agaaaaaaagaagctaaagagctagaagggttggctaagcgttctgagggaacgcctgat
gatccagtgcgtatgtatctgaaggaaatgggtacagttcctcttcttacaagagaagag
gaggtggagatttctaaaaggatagaaaaagctcaggtacaaatagaaagaattatttta
cgctttcgttattcgactaaagaagcggtttctattgcgcaatacttaattaatggtaag
gaacgatttgataagatcgtttccgaaaaagaggtggaagataagacacattttcttaat
cttttgccgaagttaatctctttgctgaaagaagaggactcttacttagaagagcggctt
ttggctttgaaagatccggcactgtccaagcaagatcaagcaaagttgaacgatgagctt
gaaaaatgccgtattcgaacacaagcttatctgagatgttttcattgtcgtcacaatgtc
acggaagattttggagaagttgtttttaaagcttatgactcgttcttacagttggaacaa
caaatcaatgatttaaaggttcgtgctgaaagaaataagtttgctgcagcaaaactagct
gcagcccgacgcaagctttacaaacgagaagttgcagcgggacgtactcttgaagagttt
aaaaaagatgtgcggatgttgcagcgttggatggataaaagccaggaagcaaagaaagag
atggtggaatccaacttacgtttggtgatctctatcgcgaaaaaatataccaaccgaggg
ctgtctttcttggatttgattcaagaaggaaatatgggcttaatgaaagctgttgaaaaa
tttgagtatcgccggggttataaattttcaacttatgccacttggtggattcgtcaggct
gtgacgcgagctattgccgatcaggcaagaaccattcgaattcctgttcatatgatcgag
accattaataaggtgcttcgtggagccaagaaattaatgatggaaacaggaaaagagcct
acgcccgaagaactcggagaggaactaggtttcactccagaccgtgttcgagaaatttat
aagatcgctcagcatccgatttctttacaggctgaggttggagatagtggagaaagctct
tttggagatttcttggaagatacagctgttgaatctccggcagaggcaacaggctactcc
atgttgaaagacaaaatgaaggaagtgctaaaaacgcttactgatcgcgaacgttttgtt
ttgatccatcggtttggccttttagatggccgtcccaaaactttggaagaggtaggctcc
gcgttcaacgtgacacgagagcggattcgacaaatcgaagccaaagctttgcgaaaaatg
cgtcatcctatccgttccaaacagctacgagcattcttggatttattggaagaagagaag
actggttcgggcaagattaagagttataagaattaa
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