Clavibacter michiganensis subsp. insidiosus: VO01_00035
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Entry
VO01_00035 CDS
T03862
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmh03032
]
VO01_00035
03400 DNA repair and recombination proteins [BR:
cmh03400
]
VO01_00035
Enzymes [BR:
cmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VO01_00035
DNA replication proteins [BR:
cmh03032
]
Prokaryotic type
DNA Topoisomerases
VO01_00035
DNA repair and recombination proteins [BR:
cmh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VO01_00035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF7737
KELK
VPS11_N
Motif
Other DBs
NCBI-ProteinID:
AJW80312
UniProt:
A0A0D5CLZ5
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All DBs
Position
8232..10781
Genome browser
AA seq
849 aa
AA seq
DB search
MPGAIIDPDATVVVTHDRIEQVDLQLEMQRSFLDYAMSVIVQRALPEVRDGLKPVHRRVI
YAMYDGGYRPDRSFFKSARVVGEVMGQFHPHGDSSIYDALVRLVQPWSLRYPLALGQGNF
GSAGNDGAAAPRYTETKMAPLAMEMVRDITEDTVDFQDNYDGRTLEPKILPSRFPNLLVN
GSVGIAVGMATNIPPHNLREVAAGAQWLLAHPDANREELLEALLERIKGPDFPTGAQVLG
TKGIIDAYRTGRGSITMRAVVAVEEIQGRVCLVVTELPYQVNPDNLAIKIAELVKDGKLG
GVADIRDETSGRTGQRLVIVLKRDAVAKVVLNNLYKHTQLQENFGANMLAIVDGIPRTLA
LDGFISAWVDHQIDVIVRRTQYRLNEAEARAHILRGYLKALDALDDVIALIRRSETVEVA
RSGLMKLLDIDELQANAILEMQLRRLAALERQKIQDQAAELEERIAEYKHILATPTVQRE
IISTELQEITDKYGDDRRTEIMLGFDGDMSMEDLIPEEEMVVTVTRGGYIKRTRIDNYRS
QHRGGKGVRGAQLRADDVVEHFFVTTTHHWLLFLTDKGRVYRAKAYELQEAGRDAKGQHV
ANLLAMQPDEEIQQVLDIRDYQVAQYLVLATRDGLMKKTALTEYDTNRTGGIIAINLRDG
DALVSALLVDEDDDLLLVSRKGMSLRFSADNQALRPMGRSTSGVKGMTFRGDDTLLSASV
VGEQGYVFVVTEGGFAKRTAADQYRVQNRGGMGIKVAKLQDARGDLAGALIVGEEDEILV
VLASGKVVRSVVAEVPAKGRDTMGVVFARFADDDRIISLAKNSERNLVVPEAAPDASDGT
AAGKGTPDE
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
ctgccgggcgccatcatcgaccctgacgccacggtcgtcgtcacgcacgaccgcatcgag
caggtcgacctccagctcgagatgcagcgctcgttcctcgactacgcgatgagcgtcatc
gtccagcgcgcgctccccgaggtgcgcgacggcctgaagcctgtgcaccgccgcgtgatc
tacgccatgtacgacggcggctaccggcccgaccgctccttcttcaagtcggcccgcgtg
gtcggtgaggtcatggggcagttccacccgcacggcgactcgtccatctacgacgcgctc
gtccgcctcgtccagccgtggagcctgcgctacccgctcgcgctcggccagggcaatttc
ggctccgccggcaacgacggcgcggccgccccgcggtacaccgagaccaagatggccccg
ctcgccatggagatggtccgggacatcaccgaggacacggtcgacttccaggacaactac
gacgggcgcacgctcgagccgaagatcctgccgtcgcgcttcccgaacctgctggtcaac
ggatccgtcggcatcgcggtcggcatggccaccaacatcccgccgcacaacctccgcgag
gtcgcggccggtgcgcagtggctgctcgcccacccggatgcgaaccgggaggaactcctc
gaggcgctcctcgagcggatcaagggccccgacttcccgaccggcgcccaggtgctcggc
accaagggcatcatcgacgcgtaccgcaccggccgcggctccatcacgatgcgggccgtc
gtcgccgtcgaggagatccagggccgcgtctgcctcgtcgtcaccgagctcccgtaccag
gtgaaccccgacaacctggcgatcaagatcgccgagctcgtgaaggacggcaagctcggc
ggcgtcgccgacatccgcgacgagacctccggccgcacgggccagcgcctcgtcatcgtg
ctcaagcgcgacgcggtcgccaaggtcgtgctgaacaacctctacaagcacacgcagctg
caggagaacttcggcgcgaacatgctcgcgatcgtcgacgggatcccgcgcacgctggcg
ctcgacggcttcatctccgcgtgggtcgaccaccagatcgacgtcatcgtgcgccgcacg
cagtaccgcctcaacgaggccgaggcccgcgcgcacatcctgcgcggctacctgaaggcg
ctcgacgcgctcgacgacgtcatcgccctcatccgccggtccgagacggtcgaggtcgcc
cgcagcggcctgatgaagctgctcgacatcgacgagctgcaggccaacgcgatcctcgag
atgcagctccgccgcctcgccgcgctggagcgccagaagatccaggaccaggcggccgag
ctcgaggagcgcatcgccgagtacaagcacatcctggcgacgcccaccgtgcagcgggag
atcatcagcaccgagctgcaggagatcaccgacaagtacggcgacgaccggcgcacggag
atcatgctcggcttcgacggcgacatgagcatggaggacctcatccccgaggaggagatg
gtggtcacggtcacgcgcggcgggtacatcaagcgcacgcgcatcgacaactaccgcagc
cagcaccgcggcggcaagggcgtgcgcggtgcgcagctccgggccgacgacgtggtcgag
cacttcttcgtcacgaccacgcaccactggctcctgttcctcacggacaagggccgcgtc
taccgcgccaaggcgtacgagctgcaggaggccggccgcgacgccaagggccagcacgtc
gccaacctgctcgcgatgcagccggacgaggagatccagcaggtcctcgacatccgcgac
taccaggtggcccaatacctcgtgctcgccacccgcgacggcctgatgaagaagacggcc
ctcacggagtacgacacgaaccgcaccggcggcatcatcgcgatcaacctccgcgacggc
gacgcgctcgtctctgcgctcctcgtggacgaggacgacgacctcctcctcgtctcccgc
aagggcatgtcgctgcggttctccgcggacaaccaggcgctccgtccgatgggtcgatcc
acatccggcgtgaagggcatgacgttccgcggggacgacacgctgctcagcgcatccgtc
gtcggcgagcagggctacgtgttcgtcgtcaccgagggcggcttcgcgaagcgcaccgcc
gcggaccagtaccgcgtgcagaaccgcggcggcatgggcatcaaggtggccaagctgcag
gacgcccggggcgacctcgcgggggcgctcatcgtcggcgaggaggacgagatcctcgtc
gtgctcgccagcggcaaggtggtacggtctgtcgtggccgaggtcccggcgaagggcaga
gacaccatgggtgtcgtgttcgcccggttcgcggacgacgacaggatcatctcactggcc
aagaactccgaacgcaacctggtggtccccgaagctgcgcccgacgcgtccgacggtacc
gctgctggaaagggaacacctgatgagtag
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