Clavibacter michiganensis subsp. insidiosus: VO01_01300
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Entry
VO01_01300 CDS
T03862
Name
(GenBank) MFS transporter
KO
K08217
MFS transporter, DHA3 family, macrolide efflux protein
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmh02000
]
VO01_01300
01504 Antimicrobial resistance genes [BR:
cmh01504
]
VO01_01300
Transporters [BR:
cmh02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-3 (12 spanner) (DHA3) [TC:
2.A.1.21
]
VO01_01300
Antimicrobial resistance genes [BR:
cmh01504
]
Gene variants
Macrolide resistance genes
Transporters
VO01_01300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
MFS_3
Motif
Other DBs
NCBI-ProteinID:
AJW80346
UniProt:
A0A0D5CL16
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All DBs
Position
252329..253657
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AA seq
442 aa
AA seq
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MSAADQAVVAARWKRNATLFLSGQTVSLFGSMLVQYAVMWWVTFETRSGLAVALYAVAAF
LPQGIVSIFGGTLADRMNRRVLVIASDSTIAIVTLALALLMMNGVTDLWIILLAVAVRSV
GAGFQTPAVQAMIPQIVPPDQLLRVNGIFGTIQSAMALLAPAAAGAIFAAYGLVPLFFVD
AITAAIGIAFLLSVAVPTLASIVDKTSTYREDLVEGIRYIGGNPVVRWLLVVFAIIFLLT
VAPSFITPLLVARTYGTEVWMVTVLEIAFSVGMLGGGALVSTLFAKSDRMTLILVSCFGF
AIFTAGLGLSPNLWVFYGFMFAIGLFVPLFSAPFMTLVQETVAPEMHGRVFSYVGIVMAL
ATPIGAVAFGPLADVFSVQALLVAAGIITVVVIAVAISLPSGRAAIRLARAKKAEADADA
GDASAHEASTTTVEPPRTTPAA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgccgaccaggccgtcgtcgccgcccgctggaagcgcaatgcgaccctcttc
ctcagcggccagaccgtctcgctgttcggctcgatgctcgtccagtacgcggtcatgtgg
tgggtcacgttcgagacccgctcgggcctcgcggtcgcgctctacgcggtcgccgcgttc
ctgccgcagggcatcgtctcgatcttcggcggcaccctcgccgaccgcatgaaccgccgc
gtgctcgtcatcgcgtccgacagcaccatcgcgatcgtcaccctcgccctcgccctgctc
atgatgaacggcgtcaccgacctctggatcatcctgctcgcggtggccgtgcgctccgtc
ggcgccgggttccagacgcccgcggtgcaggcgatgatcccgcagatcgtgccgccggac
cagctgctgcgcgtgaacgggatcttcggcaccatccagtcggcgatggccctgctcgcg
ccggccgccgcgggcgcgatcttcgccgcctacggcctcgtgccgctcttcttcgtcgac
gcgatcacggccgcgatcggcatcgcgttcctgctctcggtcgcggtgccgaccctcgcg
tccatcgtcgacaagacgtcgacctaccgcgaggacctcgtcgaggggatccgctacatc
ggcggcaaccccgtggtccgctggctgctcgtggtcttcgcgatcatcttcctgctcacg
gtcgcgccgtcgttcatcacgccgctgctcgtcgcgcgcacctacggcaccgaggtgtgg
atggtgacggtgctcgagatcgccttcagcgtcggcatgctcggcggcggcgcgctcgtg
tcgacgctgttcgcgaagtccgaccgcatgacgctgatcctcgtcagctgcttcggcttc
gcgatcttcaccgccggtctcggcctcagccccaacctctgggtgttctacggcttcatg
ttcgcgatcggcctgttcgtgccgctgttctcggcgccgttcatgacgctcgtgcaggag
accgtcgcgcccgagatgcacggccgcgtcttcagctacgtcggcatcgtcatggcgctc
gcgaccccgatcggcgcggtcgcgttcggcccgctcgccgacgtgttcagcgtgcaggcg
ctgctggtggcggcggggatcatcacggtcgtcgtgatcgcggtcgcgatctccctgccc
tcgggccgcgccgcgatccggttggcgcgcgcgaagaaggcggaggcggatgcggacgcg
ggggacgcctcggctcacgaagcctcgaccactacggtggagcctccgcgtacgaccccg
gctgcctag
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