Clavibacter michiganensis subsp. insidiosus: VO01_02615
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Entry
VO01_02615 CDS
T03862
Name
(GenBank) RNA polymerase sigma 70
KO
K03086
RNA polymerase primary sigma factor
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Pathway
cmh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VO01_02615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmh03021
]
VO01_02615
Transcription machinery [BR:
cmh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VO01_02615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
KORA
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
AJW78159
UniProt:
A0A0D5CFW4
LinkDB
All DBs
Position
complement(531478..532521)
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AA seq
347 aa
AA seq
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MTMTPTRPTAAETTSDTELDQVESVRPVDPYADSDLPEPSLVTPGASTDAVKDYLRQIGR
VPLLTAEQEVTVARRIEVGVLSQEVLDTRTDLTSAERREYQTLAQDGMRAKQHLVNANLR
LVVSIAKRYTGRGLPFLDLIQEGNMGLVRAVEKFDYQAGFKFSTYASWWIKQSITRGMAD
TSRTIRIPVHTVEHINRINAVQRELAVELGRDPSMEEIARESDTPVTKVRYLLDRAQEPM
SLQVLVGGSGGDGDTEMADLIEDADVTQPIDVVTQQLMAAHVMRLIDGLAERDAEVVRMR
FGLAGLEPRSLAFVSQQLGVTRERVRQIEKKVLAKLRIPELETYIRG
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgacaccgaccaggcccacggccgccgagaccacctccgacaccgagctcgac
caggtcgagtccgtccgtcccgtcgatccgtacgcggactccgacctccccgagccgtcg
ctcgtcacccccggcgccagcaccgacgccgtcaaggactacctccgccagatcggccgc
gtgccgctgctcaccgccgagcaggaggtgaccgtggcccgccgcatcgaggtgggcgtg
ctgtcgcaggaggtcctcgacacccgcaccgacctgacctctgccgagcgccgcgagtac
cagacgctggcgcaggacgggatgcgcgccaagcagcacctcgtgaacgcgaacctgcgc
ctcgtcgtcagcatcgccaagcgctacacgggccgcggcctgccgttcctggacctgatc
caggagggcaacatgggcctcgtccgggcagtcgagaagttcgactaccaggccggcttc
aagttctcgacctacgcgtcctggtggatcaagcagtccatcacccgcggcatggccgac
acgagccgcaccatccggatccccgtgcacacggtcgagcacatcaaccgcatcaacgcg
gtgcagcgcgagctcgccgtcgagctcggccgcgacccctccatggaggagatcgcgcgc
gagtcggacacgcccgtcacgaaggtgcgctacctgctcgaccgcgcgcaggagcccatg
tcgctgcaggtcctggtgggcggcagcggcggcgacggcgacaccgagatggccgacctc
atcgaggacgcggacgtcacgcagcccatcgacgtggtgacgcagcagctcatggccgcg
cacgtcatgcgcctcatcgacgggctcgccgagcgcgacgccgaggtcgtgcggatgcgc
ttcggcctcgccggcctcgagccgcgctcgctcgccttcgtgagccagcagctcggcgtg
acacgcgagcgcgtgcgccagatcgagaagaaggtgctcgccaagctccgcatcccggag
ctggagacctacatccgcggctga
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