Clavibacter michiganensis subsp. insidiosus: VO01_02920
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Entry
VO01_02920 CDS
T03862
Symbol
rocD
Name
(GenBank) ornithine--oxo-acid aminotransferase
KO
K00819
ornithine--oxo-acid transaminase [EC:
2.6.1.13
]
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Pathway
cmh00330
Arginine and proline metabolism
cmh01100
Metabolic pathways
cmh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
VO01_02920 (rocD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cmh01007
]
VO01_02920 (rocD)
Enzymes [BR:
cmh01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.13 ornithine aminotransferase
VO01_02920 (rocD)
Amino acid related enzymes [BR:
cmh01007
]
Aminotransferase (transaminase)
Class III
VO01_02920 (rocD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Big_2
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AJW78213
UniProt:
A0A0D5CEY5
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All DBs
Position
593166..594410
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AA seq
414 aa
AA seq
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MTDTIDRPAASDAGSRAIHAEEAHAAHNYHPLPVVVASGQGAWVTDLDGRRLLDCLAAYS
AVNFGHSHPDLVRAATEQLGRITLTSRAFHNDKLGPFVTALAELAGKDMVLPMNTGAEAV
ESGIKVARAWGYRVKGVAAGRAKIIVMAGNFHGRTTTIVSFSDDEEARADFGPFTPGFVT
VPYGDAAALEAAIDEDTVAVLVEPIQGEAGIVVPPEGYLADVRRICTRERVLMIADEIQS
GLGRTGATFECDNSDVVPDLYLLGKALGGGIVPVSAVVGDADVLGVIQPGQHGSTFGGNP
LAAAVGHAVVDMLATGEPQERARRLGAVLHARLADLVGHGVLEVRGRGLWAGIDIDPALA
TGRAVCERLAERGVLAKDTHGSTIRLAPPIVVEEEDLVWAVDQLAEVLMELGAR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccatcgaccgccccgccgcgtccgacgcgggatcccgcgcgatccacgcc
gaggaggcgcacgccgcgcacaactaccacccgctgcccgtcgtggtcgcgtccggacag
ggcgcgtgggtcaccgacctcgacggccggcgcctgctcgactgcctcgccgcctactcg
gccgtgaacttcgggcactcgcacccggacctcgtgcgggccgcgaccgagcagctcggg
cggatcacgctcacgagccgcgcgttccacaacgacaagctgggcccgttcgtcacggcg
ctcgcggagctcgccggcaaggacatggtcctgccgatgaacacgggcgcggaggccgtg
gagtcggggatcaaggtcgcgcgcgcgtggggctaccgcgtgaagggcgtggccgctggg
cgcgcgaagatcatcgtcatggccgggaacttccacggccgcaccaccaccatcgtgagc
ttcagcgacgacgaggaggcgcgcgccgacttcgggccgttcacgcccgggttcgtcacg
gtgccgtacggcgacgccgccgcgctcgaggccgcgatcgacgaggacacggtcgccgtg
ctcgtggagccgatccagggcgaggccggcatcgtcgtgccacccgagggctacctcgcc
gacgtgcggcggatctgcacgcgcgagagggtgctgatgatcgccgacgagatccagtcg
ggcctcggccgcacgggcgcgaccttcgagtgcgacaactcggacgtcgtgccggacctc
tacctcctcggcaaggcgctcggcggcggcatcgtgcccgtctccgcggtcgtcggcgac
gcggacgtcctcggcgtcatccagccggggcagcacgggtccacgttcggcggcaacccg
ctcgccgccgccgtcggccacgcggtcgtggacatgctcgcgacgggcgagccgcaggag
cgcgcgcgtcgcctcggcgccgtgctgcacgcgcggctcgcggatctcgtgggccacggc
gtgctcgaggtgcgcggccgcggcctctgggcgggcatcgacatcgaccccgcgctcgcc
acgggccgcgcggtgtgcgagcggctggccgagcgcggcgtgctcgcgaaggacacgcac
ggctcgacgatccgcctcgcgccgcccatcgtggtggaggaggaggacctcgtctgggcc
gtcgaccagctcgccgaggtgctcatggagctcggggcgcgctga
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