Clavibacter michiganensis subsp. insidiosus: VO01_03145
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Entry
VO01_03145 CDS
T03862
Name
(GenBank) exodeoxyribonuclease I
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmh03400
]
VO01_03145
DNA repair and recombination proteins [BR:
cmh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VO01_03145
Archaeal homologous recombinant proteins
VO01_03145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AJW78251
UniProt:
A0A0D5CF55
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All DBs
Position
complement(635318..636478)
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AA seq
386 aa
AA seq
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MRILHTSDWHLGRTLHGEDLHAHHAAFLDHLVALVEEREVDVVLVAGDVYDRAVPGVPSV
RLLGDALARLSALATVIVTPGNHDSAARLGFASALLRDGLRILASVKALDVPVVIDDADG
PVAFYGVPYLDPDAVRAPLAAAADAPPLPRSHEAVLGAAMDRVRADAAGRPEARVVVVAH
AFVTGAAPSESERDIRVGGFDQVPASVFRGADYVALGHLHGAQEVRAEGPRIRYSGSPLA
FSFGERMQRKSSALVELAADGSTTVELIEAPVPRRLAEITGTLAEITDGRHADLADAWLR
LHVTDPVHPPHLVARVREALPHALVVLHEPAGRVEGKRSRVVDATTDPLEVAADFVAYAT
GASPTEAEALVLRQAYEQALGADRSA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcatcctccacacgagcgactggcacctcgggcgcaccctccacggcgaggacctg
cacgcgcatcacgcggcgttcctcgaccacctcgtcgcgctcgtggaggagcgggaggtc
gacgtggtgctcgtcgcgggcgacgtctacgaccgcgcggtgccgggcgtgcccagcgtg
cggctgctcggggacgcgctcgcgcggctgagcgcgctcgcgaccgtcatcgtcacgccg
ggcaaccacgactcggccgcgcggctcgggttcgcgtcggcgctgctgcgggacgggttg
cggatcctcgcgtcggtcaaggcgctcgacgtgcccgtggtcatcgacgacgccgacggg
cccgtggcgttctacggggtgccgtacctggatcccgacgccgtgcgcgctccgctcgcc
gccgccgccgacgcccctcccctgccgcgctcgcacgaggccgtgctgggtgccgcgatg
gaccgggtgcgcgccgacgccgccggacgaccggaggcgcgcgtggtcgtcgtggcgcac
gcgttcgtcacgggagcggcgccgagcgagagcgagcgggacatccgcgtgggcgggttc
gaccaggtgccggcgtcggtgttccggggcgcggactacgtcgcgctcgggcacctgcac
ggggcgcaggaggtgcgggcggagggcccgcgcatccgatacagcggctcgccgctcgcg
ttctcgttcggggagcggatgcagcggaagtcgagcgcgctcgtggagctggcggccgac
ggatccaccacggtcgagctgatcgaggcgcccgtgccgcggcggctcgcggagatcacg
gggacgctcgcggagatcaccgacgggcggcacgccgacctcgcggacgcgtggctgcgc
ctgcacgtgaccgatcccgtgcacccgccgcacctcgtcgcgcgcgtgcgggaggcgctg
ccgcacgcgctcgtcgtcctgcacgagcccgcggggcgcgtggagggcaagcggtcgcgc
gtggtcgacgccacgacggatccgctcgaggtcgccgccgacttcgtcgcgtacgcgacc
ggggcgtcgcccaccgaggccgaggcgctcgtgctccgccaggcgtacgagcaggccctc
ggcgcggaccggagcgcctga
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