Clavibacter michiganensis subsp. insidiosus: VO01_04675
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Entry
VO01_04675 CDS
T03862
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Pathway
cmh00300
Lysine biosynthesis
cmh00470
D-Amino acid metabolism
cmh01100
Metabolic pathways
cmh01110
Biosynthesis of secondary metabolites
cmh01120
Microbial metabolism in diverse environments
cmh01230
Biosynthesis of amino acids
Module
cmh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VO01_04675
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VO01_04675
Enzymes [BR:
cmh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
VO01_04675
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AJW80412
UniProt:
A0A0D5CM80
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All DBs
Position
962890..964389
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AA seq
499 aa
AA seq
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MTANPLAPSWLQLPDDANALDPAVWSRGAARGDDGALRIAGVPATDLAARFGTPLYVMDE
DDVRARAAETLAAFTREAAAVGTSARVYYAGKAFLSIEVARWMVEEGLHIDVCSGGELAV
ALAAGADPARLGFHGNNKSVAEIDRAVGAGIGQVVIDSPVEVERVAAAAAAHGRVQPVRL
RVNSGVHAHTHEYLATAREDQKFGITLADAPGLVARIRSHASLSFTGLHAHIGSQIFETD
AFLESARRLLDLHERLLADGPVPELNLGGGFGIAYTSVDRPVPVPEIARRLARIVGDECG
RRGIAVPVIAVEPGRSIVGPSTVTLYSVGTVKDVLVTVGGVDGEVAEASSATGDIEDPRI
AEEAETAVRRYVSVDGGMSDNARPALYGADYSVRIAGRASDAVPALVRIAGKHCESGDLV
VLADYLPGDVRPDDLLAVPATGAYCWALASNYNWIGRPPVVAVRDGQARVIVRGETEADL
LARDAGTPAAASPDVNGAR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgaacccgctggccccgtcctggctgcagctccccgacgacgcgaacgcgctg
gatccggccgtctggtcccgcggggccgcccgcggtgacgacggcgccctccgcatcgcc
ggggtccccgccacggacctcgccgcgcgcttcggcaccccgctctacgtgatggacgag
gacgacgtccgcgcccgcgcggccgagacgctcgcggcgttcacgcgcgaggcggccgcc
gtcggcacgagcgcccgcgtctactacgcaggcaaggcgttcctcagcatcgaggtcgcg
cgctggatggtcgaggagggcctccacatcgacgtctgctcgggcggggagctcgccgtc
gcgctcgcggccggcgcggatcccgcccgcctcggcttccacggcaacaacaagtcggtc
gccgagatcgaccgcgcggtcggcgcggggatcggccaggtcgtcatcgacagcccggtc
gaggtggagcgcgtcgccgccgcggccgccgcgcacggccgcgtccagcccgtgcgcctc
cgcgtgaacagcggcgtgcacgcccacacgcacgagtacctcgccaccgcccgcgaggac
cagaagttcgggatcacgctcgccgacgcgcccggcctcgtcgcgcggatccggtcgcac
gcgtccctctccttcacgggcctgcacgcgcacatcggcagccagatcttcgagaccgac
gccttcctcgagtccgcccgccggctcctcgacctgcacgagcggctgctcgccgacggc
cccgtgcccgagctcaacctcggcggcggcttcggcatcgcgtacacgtcggtcgaccgg
ccggtgccggtgcccgagatcgcgcggcggctcgcgcgcatcgtcggcgacgagtgcggg
cgccgggggatcgcggtgcccgtcatcgcggtcgagcccggccgcagcatcgtcggcccc
tccacggtcaccctctactcggtcggcaccgtcaaggacgtgctcgtgaccgtcggcggc
gtcgacggcgaggtcgccgaggcctcctcggcgacgggcgacatcgaggacccgcgcatc
gccgaggaggcggagaccgccgtccgccgctacgtgagcgtcgacggcggcatgagcgac
aacgcgcgccccgccctctacggcgccgactactccgtgcgcatcgcgggccgggcctcg
gatgcggtccccgccctcgtgcgcatcgccggcaagcactgcgagagcggcgacctcgtc
gtcctcgccgactacctgccgggcgacgtccgccccgacgacctcctcgccgtccccgcg
accggcgcctactgctgggcgctcgcgagcaactacaactggatcggccgcccgcccgtc
gtcgccgtgcgcgacggccaggcccgcgtcatcgtccgcggcgagaccgaggccgacctg
ctggcgcgcgacgcgggcacgcccgcggccgcatcccccgacgtgaacggagcacgatga
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