KEGG   Clavibacter michiganensis subsp. insidiosus: VO01_05835
Entry
VO01_05835        CDS       T03862                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
cmh  Clavibacter michiganensis subsp. insidiosus
Pathway
cmh02024  Quorum sensing
cmh03060  Protein export
cmh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cmh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    VO01_05835
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VO01_05835
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VO01_05835
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cmh02044]
    VO01_05835
Enzymes [BR:cmh01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     VO01_05835
Secretion system [BR:cmh02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   VO01_05835
  Eukaryotic Sec-SRP protein
   VO01_05835
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA cobW Zeta_toxin nSTAND3 AAA_24 MMR_HSR1 AAA_31 APS_kinase ArsA_ATPase AAA_18 AAA_33 TsaE AAA_16 6PF2K AAA_30 nSTAND_NTPase7
Other DBs
NCBI-ProteinID: AJW78714
UniProt: A0A0D5CHF8
LinkDB
Position
1214340..1215911
AA seq 523 aa
MATFGTLSDRLAETFKNLRGKGKLSAADVDGTVREIRRALLEADVALDVVKAFTASVRER
ALGGEVSQALNPAQQVVQIVNEELVGILGGQQRRITFAKRPPTVIMLAGLQGAGKTTLAG
KLGKWLAKDGHTPMLVAADLQRPNAVQQLQVVGEQAGVPVFAPEPGNGKGNPVRVAKDAM
KHAVDKQYSVVIIDTAGRLGVDQELMKQAADTRKATDPDEVLFVIDAMIGQDAVATAKAF
QDGVDFTGVVLSKLDGDARGGAALSVASVTGRPIMFASTGEGLDDFEPFHPDRMASRILD
LGDILTLIEQAQQAFDEEEAMEVAQKLASDTFTLDDFLKQMQQLRGKGSLKKMMGMLPGM
GAMKEQLENFDEKEIVRTEAIIQSMTKAERQNPKLLNGSRRLRIARGSGMTVTDVNGLVQ
RFEQASKMMRTVARGGMPQIPGMGPMPGAHSSRKPVQQKKKGSKSGNPAKRAQENAALAS
GQRIGGPTAPAGSGFGLAGAAKGGANGAPSEEELASLQKFLGR
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggctaccttcggaactctctcggaccgcctcgccgagaccttcaagaacctgcgcggc
aagggcaagctcagcgccgcggacgtcgacggcaccgtccgcgagatccgccgcgcgctg
ctcgaggccgacgtcgcgctcgacgtcgtcaaggcgttcaccgcgtccgtccgcgagcgc
gcgctcggcggcgaggtcagccaggcgctgaaccccgcccagcaggtcgtgcagatcgtc
aacgaggagctcgtcgggatcctcggcggccagcagcgccgcatcaccttcgccaagagg
ccgccgacggtcatcatgctcgccggcctccagggcgcgggcaagacgaccctcgcgggc
aagctcggcaagtggctcgcgaaggacggccacacgccgatgctcgtcgcggccgacctc
cagcgccccaacgccgtgcagcagctgcaggtcgtcggcgagcaggcgggcgtccccgtc
ttcgcgcccgagcccggcaacgggaagggaaaccccgtgcgcgtcgcgaaggacgcgatg
aagcacgcggtcgacaagcagtacagcgtcgtcatcatcgacacggccggccgcctcggc
gtcgaccaggagctgatgaagcaggccgccgacacccgcaaggccaccgaccccgacgag
gtcctcttcgtcatcgacgccatgatcggccaggacgcggtcgcgaccgcgaaggccttc
caggacggcgtcgacttcacgggcgtcgtgctctcgaagctcgacggcgacgcgcgcgga
ggagcggccctctcggtcgcctccgtcaccggtcgcccgatcatgttcgcctccacgggc
gagggcctcgacgacttcgagcccttccaccccgaccgcatggcgagccgcatcctcgac
ctcggcgacatcctcaccctcatcgagcaggcccagcaggccttcgacgaggaggaggcg
atggaggtcgcccagaagctcgcgagcgacaccttcacgctcgacgacttcctcaagcag
atgcagcagctccgcggcaagggctccctcaagaagatgatgggcatgctccccggcatg
ggcgccatgaaggagcagctcgagaacttcgacgagaaggagatcgtccgcaccgaggcg
atcatccaatcgatgacgaaggccgagcgccagaacccgaagctcctcaacggctcgcgc
cgcctccgcatcgcgcgcggatccggcatgaccgtcaccgacgtcaacgggctggtgcag
cgattcgagcaggcttcgaagatgatgcgcacggtcgcccgcggcggcatgccgcagatc
cccggcatgggcccgatgcccggcgcgcactcgagccgcaagcccgtgcagcagaagaag
aagggctcgaagtcgggcaacccggccaagcgcgcgcaggagaacgcggcgctcgcgtca
ggccagcgcatcggcggacccacggcccccgccgggtcgggcttcgggctcgccggggca
gccaagggcggcgcgaacggcgccccgagcgaggaggagctcgcctcgctgcagaagttc
ctcggccgctga

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