Clavibacter michiganensis subsp. insidiosus: VO01_06170
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Entry
VO01_06170 CDS
T03862
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Pathway
cmh00061
Fatty acid biosynthesis
cmh00071
Fatty acid degradation
cmh01100
Metabolic pathways
cmh01212
Fatty acid metabolism
cmh02024
Quorum sensing
cmh04146
Peroxisome
Module
cmh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VO01_06170
00071 Fatty acid degradation
VO01_06170
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VO01_06170
09145 Cellular community - prokaryotes
02024 Quorum sensing
VO01_06170
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cmh01004
]
VO01_06170
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmh04147
]
VO01_06170
Enzymes [BR:
cmh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VO01_06170
Lipid biosynthesis proteins [BR:
cmh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VO01_06170
Exosome [BR:
cmh04147
]
Exosomal proteins
Exosomal proteins of breast milk
VO01_06170
Exosomal proteins of breast cancer cells
VO01_06170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AJW78770
UniProt:
A0A0D5CHL1
LinkDB
All DBs
Position
complement(1284877..1286565)
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AA seq
562 aa
AA seq
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MTTPTERPWLASYAPDVPHEIDLPQGSLVDIVDQSVLRFPGGTALDFLGAETSYRELGER
IARAAQGLHDAGVRAGDPVAIVLPNCPQHVVAFYAVLRLGAVVVEHNPLYTPRELQHQFE
DHGARTVIAWDRSVATIQALPDGVRPERIVSVDLTRAMPRRTRLLLRLPVPKARAARAAI
AAKVTGTTTWERISAAAPLPAEHPRPVATDLAVIQYTSGTTGAPKGAELTHLNLSANAAQ
SRAWVPTVSRGTSVVYAVLPMFHAYGLTLCLTFAMSMGSRLVLFPRFEPDLVLQAIRRHP
PTFLPAVPPIYTRLREAAEAQGVSLEGISISISGAMALPESVVVPWEERTGGWLVEGYGL
SECSPVLMANPVGDTRRAGTVGLPLPNTEVRVVDPQDPTVDRPAGEPGELLVRGPQVFRG
YHGRPDETAAVLLEGGWFRTGDVVTIDEDGFVRIADRIKELIISGGFNVSPSEVEDAVRE
LPGVRDVAVVGIPRVGGDEEVVAAVVLEEGATLDEQAARTTLRGELAAYKVPRRIVVLDE
LPTSLLGKVLRRKVREGIVEAE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacccccaccgagcggccctggctggccagctacgcgcccgacgtcccgcacgag
atcgacctgccgcagggatcgctcgtcgacatcgtcgaccagtccgtgctccggttcccc
gggggcacggcgctcgacttcctcggggcggagaccagctaccgggagctcggcgagcgg
atcgcgcgcgccgcgcagggtctgcacgacgccggcgtgcgcgcgggggaccccgtcgcg
atcgtgctgccgaactgcccgcagcacgtcgtcgcgttctacgcggtgctgcgcctcggc
gcggtggtcgtcgagcacaacccgctgtacacgccgcgcgagctgcagcaccagttcgag
gaccacggcgcccgcaccgtgatcgcgtgggacaggtcggtcgccacgatccaggcgctg
cccgacggcgtgcggcccgagcgcatcgtgtcggtcgacttgacgcgcgcgatgccccgc
cgcacccggctgctcctccgcctgcccgtcccgaaggcccgcgcggcgcgcgccgcgatc
gccgcgaaggtcacgggcacgaccacctgggagcggatctcggccgccgcgcccctgccc
gccgagcacccgcggcccgtggcgacggacctcgcggtcatccagtacacgagcggcacg
acgggcgcgcccaagggcgccgagctcacgcacctgaacctcagcgcgaacgccgcccag
tcccgcgcgtgggtgcccacggtctcgcgcggcacgagcgtcgtctacgccgtgctgccg
atgttccacgcctacggactgaccctctgcctcaccttcgcgatgagcatgggctcgcgc
ctcgtgctgttcccgcgcttcgagcccgacctcgtgctgcaggcgatccgccgccacccg
ccgaccttcctccccgccgtgccgcccatctacacgcggctgcgcgaggccgccgaggcg
cagggcgtctcgctcgaaggcatctcgatctccatctccggcgcgatggcgctccccgag
tcggtcgtcgtgccgtgggaggagcgaaccggcggctggctcgtcgagggctacggcctg
tcggagtgctcgcccgtgctgatggcgaaccccgtcggcgacacgcgccgcgcgggcacg
gtcggcctgccgctgcccaacacggaggtgcgcgtcgtggacccccaggacccgaccgtc
gaccggcccgcaggcgagcccggcgagctgctcgtgcgcggaccccaggtgttccgcggc
taccacggccgcccggacgagaccgccgccgtgctgctcgagggcggctggttccgcacg
ggcgacgtggtgacgatcgacgaggacggcttcgtgcgcatcgccgaccggatcaaggag
ctcatcatctcgggcgggttcaacgtctcgccgagcgaggtcgaggacgcggtccgcgag
ctcccgggcgtgcgggacgtcgccgtggtcgggatcccgcgcgtcggcggcgacgaggag
gtcgtggcggccgtggtgctcgaggagggcgcgacgctcgacgagcaggccgcgcggacg
acgctgcgcggcgagctggccgcctacaaggtgccgcgacggatcgtggtgctcgacgag
ctgccgacgtcgctgctcggcaaggtgctgcgccggaaggtgcgcgaggggatcgtcgag
gcggagtag
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