Clavibacter michiganensis subsp. insidiosus: VO01_06190
Help
Entry
VO01_06190 CDS
T03862
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Pathway
cmh00061
Fatty acid biosynthesis
cmh00071
Fatty acid degradation
cmh01100
Metabolic pathways
cmh01212
Fatty acid metabolism
cmh02024
Quorum sensing
cmh04146
Peroxisome
Module
cmh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VO01_06190
00071 Fatty acid degradation
VO01_06190
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VO01_06190
09145 Cellular community - prokaryotes
02024 Quorum sensing
VO01_06190
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cmh01004
]
VO01_06190
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmh04147
]
VO01_06190
Enzymes [BR:
cmh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VO01_06190
Lipid biosynthesis proteins [BR:
cmh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VO01_06190
Exosome [BR:
cmh04147
]
Exosomal proteins
Exosomal proteins of breast milk
VO01_06190
Exosomal proteins of breast cancer cells
VO01_06190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AJW78774
UniProt:
A0A0D5CHL2
LinkDB
All DBs
Position
complement(1289718..1291406)
Genome browser
AA seq
562 aa
AA seq
DB search
MSNDADRPWVRSYADGVSADIPPVIGSLVDMVERSIQRHAKAVALEFFGRETTYRELGDQ
ISRAAEGLRRLGVRKGDRVALVLPNCPQHVIAFYAVLRLGAIVVEHNPLYTPRELRHQFE
DHGARVAIAWNTVVGTIQDMPRDVPVDTIVSVDLPAAMPLATRLKLRLPVPAARRARAAI
TTPVTSTVTWEELVDHRRIAASRPRPELDDTAILQYTSGTTASPKGAILTHRNLHANAMQ
GRAWVPGLADGGETVYGVLPMFHAYGLTLCLTFAMAIGARLVLFPKFDVDLVLAAARKHP
PTFLPAVPPIYERLARGAKEKRVDLTGVRFAISGAMNLPVSTVELWEGLTGGYLVEGYGL
TETSPVALGNPIGPSRRPGTVGVPFPSTEVRVVDPEDPTADRAPGEEGELLIRGPQVFQG
YWRRPDETRAALLDGGWFRTGDIVRVDADGFTTIVDRMKELIITGGFNVSPSEVEDVVRG
APGIQGVAVVGLPSVDGGEDVTAAVVLDPGAALDEAAIRAYCRAHLTAYKVPRRVVRVDA
LPTSLIGKVLRRQVREDLQREG
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgacgccgaccgcccctgggtacgcagctacgcggacggggtgtcggccgac
atcccgcccgtcatcggatccctggtggacatggtcgagcgctccatccagcggcatgcc
aaggccgtggcgctcgagttcttcggccgcgagacgacctaccgcgagctgggcgaccag
atcagccgcgcggccgagggcctgcgccgcctcggcgtccggaagggcgaccgcgtcgcc
ctcgtgctgccgaactgcccgcagcacgtcatcgcgttctacgcggtgctccggctcggc
gcgatcgtcgtcgagcacaacccgctctacacgccccgcgagctccggcaccagttcgag
gaccacggcgcccgcgtcgccatcgcctggaacacggtcgtcggcacgatccaggacatg
ccgcgcgacgtgcccgtcgacacgatcgtctcggtcgacctgcccgccgcgatgccgctc
gccacgcgcctcaagctccgcctgccggtgcccgccgcccgccgcgcccgggccgcgatc
acgacgcccgtgacgagcaccgtcacgtgggaggagctcgtcgaccaccgccgcatcgcc
gcctcccgcccccggcccgagctcgacgacacggcgatcctccagtacacgagcggcacg
accgcgagccccaagggcgcgatcctcacccatcgcaacctgcacgcgaacgccatgcag
ggccgcgcctgggtgcccggcctcgccgacggcggcgagacggtctacggcgtgctgccg
atgttccacgcctacggcctcacgctctgcctcacgttcgccatggcgatcggggcgcgc
ctcgtgctgttcccgaagttcgacgtggacctcgtgctcgccgccgcgcggaagcacccg
ccgacgttcctgcccgccgtgccgcccatctacgagcggctcgcgcgcggggcgaaggag
aagcgggtcgacctcacgggtgtccggttcgcgatctccggcgccatgaacctgccggtc
tccaccgtcgagctgtgggagggcctcacgggcggctacctcgtcgagggctacgggctc
accgagacgtcgcccgtcgcgctcggaaaccccatcggcccgtcgcggcggccgggcacc
gtgggcgtgccgttcccgagcaccgaggtgcgggtcgtggatcccgaggacccgacggcc
gaccgcgcgccgggcgaggagggcgagctgctcatccgcggcccgcaggtgttccagggg
tactggcgccgccccgacgagacgcgcgcggcgctcctcgacggcggctggttccgcacg
ggcgacatcgtccgcgtcgacgccgacggcttcacgaccatcgtcgaccggatgaaggag
ctcatcatcacgggcggcttcaacgtctccccgagcgaggtcgaggacgtcgtgcgcggc
gcgccgggcatccagggcgtcgccgtggtcgggctgccgtcggtggacggcggcgaggac
gtcacggccgcggtcgtgctggatccgggcgccgcgctcgacgaggccgcgatccgcgcc
tactgccgcgcccacctcacggcgtacaaggtcccccgccgcgtcgtgcgggtggacgcg
ctccccacctcgctcatcgggaaggtgctgcgccgccaggtgcgcgaggacctgcagcgc
gaaggctga
DBGET
integrated database retrieval system
