Clavibacter michiganensis subsp. insidiosus: VO01_06310
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Entry
VO01_06310 CDS
T03862
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Pathway
cmh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VO01_06310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmh03019
]
VO01_06310
03009 Ribosome biogenesis [BR:
cmh03009
]
VO01_06310
Messenger RNA biogenesis [BR:
cmh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VO01_06310
Ribosome biogenesis [BR:
cmh03009
]
Eukaryotic type
Pre-60S particles
RNases
VO01_06310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJW78795
UniProt:
A0A0D5CHM9
LinkDB
All DBs
Position
complement(1313445..1314065)
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AA seq
206 aa
AA seq
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MGNNADRLVWIDCEMTGLDLAIDELVEVAVVVTDFDLVPVDDGFTIVINPDPAALANMGE
FVTDMHRSSGLLEEIPGGVSLADAEFAVLEYLLQHVPNGGKAPIAGNTIGTDRAFLAKYM
PRVDAHLHYRSVDVSSIKVLAKEWFPRIYFNSPAKNGGHRALADILESIRELEYYRRAAF
VPAPGPATDDVQAIAADVTSAWAPRL
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacaacgcggaccggctggtgtggatcgactgcgagatgacggggctcgacctc
gcgatcgacgagctggtggaggtcgcggtggtcgtcaccgacttcgacctcgtgcccgtc
gacgacggcttcacgatcgtcatcaaccccgaccccgcggcgctggccaacatgggcgag
ttcgtcaccgacatgcaccgctcctcggggctactcgaggagatccccgggggcgtcagc
ctcgccgacgccgagttcgcggtgctggagtacctgctgcagcacgtgccgaacggcggc
aaggcccccatcgcgggcaacaccatcggcaccgaccgcgccttcctcgcgaagtacatg
ccccgcgtggacgcgcacctgcactaccgcagcgtcgacgtctcctccatcaaggtgctc
gccaaggagtggttcccccggatctacttcaactcccccgcgaagaacggcggccaccgc
gccctcgccgacatcctcgagtcgatccgcgagctcgagtactaccgccgtgcggcgttc
gtgccggcgcccgggcccgcgaccgacgacgtgcaggccatcgccgcggacgtcacgtcc
gcgtgggccccgcggctgtag
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