Clavibacter michiganensis subsp. insidiosus: VO01_06515
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Entry
VO01_06515 CDS
T03862
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Pathway
cmh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VO01_06515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmh02000
]
VO01_06515
Transporters [BR:
cmh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
VO01_06515
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AJW78830
UniProt:
A0A0D5CHQ6
LinkDB
All DBs
Position
complement(1355993..1357639)
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AA seq
548 aa
AA seq
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MIPTSRTRALAGLGALAATALLLTGCTSATPEASTTPVSGGTLVYASGDAEPECLDPHVG
GNYPQALVSSQFLEPLVSLDGKGGITPWLADSWTWSDDGLGLELKLRQGVTFTDGTPFDA
DAVVANIRHVQDPATLSSTGYLALQAITDATAVDASTVRLTLSTPDSALLESLSQPWLAM
ESPAGIARGTDANCAQPIGTGPFSVERWDRQQSISLVRNDAYSSPPADAAHTGPAYLERI
DWRFLPDAASRYAALQSGEVDVIDNAQPDAIASATAGGALGELDAPRPGAANRIELNSGQ
APFDDERVREAFIRAADVDAGITALFRGTAERSYSPLASTEPAAVSDPDLFGIDADRAAR
LLDEAGWSAKDADGIRTKDGQRLTLRFPVSTNQSIPAEQSLFEQIQATTKQVGFDVQLEP
MDLASWYAALGDDAYELVSAPYTKAGPDVLRILYDTSGITPAPSGYFANHAKVSVPEIDQ
ALAEARATTDLDRRNALYADVQRRVMAGHWILPLYDQQNHFLHGTAVQGLRALPSVSTPT
LYDTWLAR
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgatccccacctcgcgcacccgcgccctcgcgggcctcggcgccctcgccgcgaccgcc
ctcctcctcaccggatgcacctcggccacccccgaggcctcgaccacgcccgtctccggc
ggcaccctcgtctacgcgtcgggcgacgccgagcccgagtgcctcgacccgcacgtcggc
ggcaactacccgcaggcgctcgtctcctcccagttcctcgagccgctggtgtcgctcgac
gggaagggcgggatcacgccgtggctcgccgacagctggacctggagcgacgacgggctc
gggctcgagctgaagctgcgccagggggtgacgttcaccgacggcacgccgttcgacgcg
gacgcggtggtcgcgaacatccgccacgtgcaggatcccgcgacgctctcctccaccggc
tacctggcgctgcaggcgatcacggacgcgaccgcggtcgacgcctccaccgtgcggctc
acgctctcgacgcccgacagcgcgctgctcgagtccctctcgcagccgtggctcgccatg
gagtcgcccgccgggatcgcccgcggcacggacgcgaactgcgcgcagcccatcggcacc
ggccccttcagcgtcgagcgctgggaccgccagcagtcgatctcgctcgtgcgcaacgac
gcctactcgtcgccgcccgccgacgccgcgcacaccgggccggcgtacctcgagcgcatc
gactggcgcttcctgccggacgccgcctcccgctacgcggcgctgcagagcggcgaggtc
gacgtgatcgacaacgcgcagccggacgcgatcgcctcggccacggcgggcggcgcgctc
ggcgagctggacgcgccgcggccgggcgccgcgaaccgcatcgagctgaactcgggccag
gcgcccttcgacgacgagcgcgtgcgcgaggcgttcatccgcgcggccgacgtcgacgcg
gggatcaccgcgctgttccggggcaccgccgagcgctcgtactcgccgctcgcgagcacg
gagccggccgccgtgtccgaccccgacctcttcggcatcgacgccgaccgcgcggcccgg
ctcctcgacgaggcgggctggtccgcgaaggacgccgacgggatccgcacgaaggacggc
cagcgcctcacgctgcgcttccccgtgagcaccaaccagtcgatcccggccgagcagtca
ctcttcgagcagatccaggccaccaccaagcaggtcggcttcgacgtgcagctcgagccc
atggacctcgcttcctggtacgcggcgctcggcgacgacgcgtacgagctcgtgagcgcg
ccgtacacgaaggcgggtcccgacgtgctccggatcctctacgacacctccggcatcacg
cccgcgccgagcggctacttcgccaaccacgccaaggtgtcggtgccggagatcgaccag
gcgctcgccgaggcgcgcgccacgaccgacctcgaccggcggaacgctctctacgcggac
gtgcagcgtcgcgtgatggccgggcactggatcctgccgctctacgaccagcagaaccac
ttcctgcacggcaccgctgtccagggcctgcgtgccctgccgtcggtctccacgccgacg
ctgtacgacacctggctcgcccggtga
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