Clavibacter michiganensis subsp. insidiosus: VO01_06880
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Entry
VO01_06880 CDS
T03862
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Pathway
cmh03030
DNA replication
cmh03430
Mismatch repair
cmh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VO01_06880
03430 Mismatch repair
VO01_06880
03440 Homologous recombination
VO01_06880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmh03032
]
VO01_06880
03400 DNA repair and recombination proteins [BR:
cmh03400
]
VO01_06880
Enzymes [BR:
cmh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VO01_06880
DNA replication proteins [BR:
cmh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VO01_06880
DNA repair and recombination proteins [BR:
cmh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VO01_06880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AJW78892
UniProt:
A0A0D5CHZ8
LinkDB
All DBs
Position
1436755..1437783
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AA seq
342 aa
AA seq
DB search
MATRTSRSTAAKPSAAIPQLPWDAVRPAPIVLVSGTEALLADRAMRRLRDILTAEDPRIE
VSDIEADSYAPGELITLASPSLFAEPRLIRVVNVEKCSDQFLLDAVAYLDSPADDTYVVL
RHAGGVRGKKLLDAVRAGTGGGIEIVCAELKKDSEKHDFAVAEFRAAKRSITPGAVRQLV
AAFQDDVSELASACQQLISDTAHEITEVTVDQYYGGRVEINAFAVADAAIAGRSGEALVL
LRHALTSGADPVPLIAAFAMKIRTMAKVSGVSGASGQLASKLGMAPWQVDRARRDLQLWD
DAGLGRAIEALAEADAQVKGGGRDPVYSLERMVRTIASRGRD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaggacgtcccgcagcacggccgcgaagccctccgcggccatcccgcagctc
ccgtgggacgcggtgcggccggcgcccatcgtcctcgtgtccggcaccgaggccctcctc
gccgaccgggcgatgcgacgcctccgcgacatcctcacggcggaggacccccgcatcgag
gtctcggacatcgaggccgactcgtacgcgccgggcgagctcatcacgctggcgagcccg
tccctcttcgccgagccgcggctcatccgggtcgtcaacgtggagaagtgctcggaccag
ttcctgctcgacgccgtggcctacctcgactcgccggccgacgacacctacgtggtgctc
cggcacgccgggggagtgcgcggcaagaagctcctcgatgccgtgcgcgcgggcaccggc
ggcggcatcgagatcgtgtgcgcggagctcaagaaggacagcgagaagcacgacttcgcc
gtcgccgagttccgggcagcgaagcgctccatcacgccgggtgccgtgcggcagctcgtc
gcggcgttccaggacgacgtgagcgagctcgcgtcggcgtgccagcagctcatctccgac
acggcccacgagatcaccgaggtcacggtcgaccagtactacggcggccgggtcgagatc
aacgccttcgcggtcgcggacgcggcgatcgccggccgcagcggcgaggcgctcgtgctg
ctccggcatgcgctcacctcgggcgcggatccggtgcccctcatcgcggccttcgccatg
aagatccgcacgatggcgaaggtgtcgggcgtctccggcgcgtcgggccagctcgcgtcg
aagctcggcatggcgccgtggcaggtcgaccgcgcccgacgcgacctgcagctgtgggac
gacgcgggcctcggccgggccatcgaggccctcgccgaagcggacgcgcaggtcaagggc
ggcgggcgcgatcccgtctactcgctggagcgcatggtgcgcaccatcgcctcccgcggc
cgcgactga
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