Clavibacter michiganensis subsp. insidiosus: VO01_07450
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Entry
VO01_07450 CDS
T03862
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
tRNA_synthFbeta
TXNDC16_3rd
Peptidase_M15_2
HAAS
Motif
Other DBs
NCBI-ProteinID:
AJW78989
UniProt:
A0A0D5CI73
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Position
complement(1561626..1563755)
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AA seq
709 aa
AA seq
DB search
MTDTSRFRELVALDPDEVVTHSFVCDVPLPSGGVLALVTLDNGRDHTRPSTLGPATLLEL
ADALDGLAIRAAAGEIHGVAITGKPFILAAGADLSKVGEIPSRDVGRQMAQLGHDTLGRL
HRLGVPSFTFVNGLALGGGLEIGLNSDYRTVDESVPAVALPEVFLGIIPGWGGAWLLPNL
IGIENALKVIIENPLKNNRTLKAQDVMELGIADASFPSASFLEQSIRWADGVISGAIEVK
RPHAPGRLERLAKWDVAIGIARKSLEQRIGTVAQSPYRALDLLQAAKRSTREEGFAAEDE
ALADLISGDQFRASIYAFDLVQKRAKRPAGAPDKALARKVTKVGVVGAGLMASQFALLFV
RRLQVPVVITDLDQARVDAGVAGIHGEIRKLAEKGRVSPDEANRLQALVTGTTDKADFAD
ADWVIEAVFEELSVKQAVFAEIEQHVSETAILATNTSSLSVERIAERLRHPERVVSFHFF
NPVAVMPLIEVVRTPQTTDETLSTAMQVAKQLRKNAVITRDTPGFVVNRILAKVLGEAMH
AVDTGTPFEVVDRSLAPFGLPMTPFELLELVGLKVGAHVLDTHHAAFPDRFFESPNLHRL
ADLGRIYARDAKGRPTGFDKEAVRIVKGGKSPMTAEEIRERVETGLADEVHRMLEDDVVH
AAEDIDLCLILGAGYPFQMGGLTPYLDRVGASDRAFGDTFHHPPIRGVA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacaccagccgcttccgggagctcgtggcgctcgatcccgacgaggtcgtcacc
cactcgttcgtctgcgacgtgccgctgccgtccggcggcgtgctcgcgctcgtcacgctc
gacaacggccgcgaccacacgcggccgtccacactcggcccggccacgctgctcgagctc
gcggacgcgctcgacggcctggcgatccgggcggccgccggggagatccacggtgtcgcg
atcacgggcaagccgttcatcctcgccgcgggcgcggacctcagcaaggtcggcgagatc
cccagccgcgacgtcggccgccagatggcgcagctcgggcacgacaccctcggacgcctg
caccgcctcggcgtgccgtcgttcacgttcgtcaacgggctcgcgctcggtggcggtctc
gagatcggactcaactccgactaccgcacggtcgacgagtccgtgccggcggtcgcgctg
cccgaggtcttcctcgggatcatccccggttggggtggcgcgtggctgctgccgaacctc
atcggcatcgagaacgccctcaaggtcatcatcgagaacccgctcaagaacaaccgcacg
ctgaaggcccaggacgtgatggagctcggcatcgccgacgcgtcgttcccgtccgcgtcc
ttcctcgagcagtcgatccggtgggccgacggggtcatctccggcgccatcgaggtcaag
cgcccgcacgcgcccggccgcctcgagcgcctcgccaagtgggacgtcgccatcggcatc
gcgcggaagtcgctcgagcagcgcatcggcaccgtggcgcagtcgccgtaccgcgcgctc
gacctgctgcaggccgccaagcgcagcacgcgcgaggagggcttcgcggccgaggacgag
gccctcgccgacctcatctccggcgaccagttccgcgccagcatctacgcgttcgacctc
gtgcagaagcgcgccaagcggcccgcgggagcgccggacaaggccctggcccggaaggtc
accaaggtcggcgtcgtcggggccggcctcatggcgtcgcagttcgccttgctgttcgtg
cgccgcctccaggtccccgtggtcatcacggacctcgaccaggcgcgcgtggacgcgggc
gtcgccggcatccacggcgagatccgcaagctcgcggagaagggacgcgtctcccccgac
gaggccaaccgcctccaggcgctcgtcacgggtacgaccgacaaggccgacttcgccgac
gcggactgggtgatcgaggccgtgttcgaggagctcagcgtgaagcaggcggtcttcgcc
gagatcgagcagcacgtctccgagaccgcgatccttgccacgaacacgtcgagcctctcg
gtcgagcgcatcgccgagcggctgcggcacccggagcgcgtggtgagcttccacttcttc
aacccggtcgccgtgatgccgctcatcgaggtcgtgcgcaccccgcagaccaccgacgag
acgctgtcgaccgcgatgcaggtggcgaagcagctccgcaagaacgccgtcatcacccgg
gacaccccgggcttcgtggtgaaccggatcctcgcgaaggtcctcggcgaggccatgcac
gcggtcgacacgggcacgcccttcgaggtcgtcgaccggtcgctcgcgccgttcggcctg
ccgatgacgccgttcgagctgctcgagctcgtcggcctcaaggtcggcgcgcacgtgctc
gacacgcaccacgccgcgttcccggaccggttcttcgagagcccgaacctgcaccggctc
gccgatctcgggcgcatctacgcgcgggacgcgaagggccggccgaccggcttcgacaag
gaggccgtgcgcatcgtcaagggcgggaagtcgcccatgacggcggaggagatccgcgag
cgcgtcgagaccggcctcgccgacgaggtgcaccgcatgctcgaggacgacgtcgtgcac
gcggcggaggacatcgacctgtgcctcatcctcggcgccggctaccccttccagatgggc
ggcctcacgccgtacctcgaccgcgtcggcgcgagcgaccgggcgttcggcgacacgttc
caccacccgccgatccgcggcgtggcgtag
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