Clavibacter michiganensis subsp. insidiosus: VO01_08010
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Entry
VO01_08010 CDS
T03862
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Pathway
cmh03030
DNA replication
cmh03410
Base excision repair
cmh03420
Nucleotide excision repair
cmh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VO01_08010
03410 Base excision repair
VO01_08010
03420 Nucleotide excision repair
VO01_08010
03440 Homologous recombination
VO01_08010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmh03032
]
VO01_08010
03400 DNA repair and recombination proteins [BR:
cmh03400
]
VO01_08010
Enzymes [BR:
cmh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VO01_08010
DNA replication proteins [BR:
cmh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VO01_08010
DNA repair and recombination proteins [BR:
cmh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VO01_08010
NER (nucleotide excision repair)
GGR (global genome repair) factors
VO01_08010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AJW79084
UniProt:
A0A0D5CIH0
LinkDB
All DBs
Position
complement(1677020..1679704)
Genome browser
AA seq
894 aa
AA seq
DB search
MPNTEKPTLLVIDGHSLAFRAFYALPAESFQNREGQHTNAVHGFIAMLINLLQKEKPTHV
GVAFDISRFSFRTREYPEYKGTRGETPVEFTGQVPLLERALKTMNIPTLTKEDHEADDIL
ATLATQGREQGFRVLVVSGDRDAIQLVNDDVTLLYPSTQGVSQLTRYDAEKVFEKYGVQP
GMYPDIAALVGETSDNLIGVDKVGPKTAVKWLNQYGSLDAVLEHRDEISGKVGDNLRAQY
ENVIRNRRLNRLLTDVELPLGPADLERKPIDEPALREVFAVLEFKQLLDRVLKLEGSGAS
ASSEGTPVGAVEQEPSTAPAAPRPQQLLDEELAKWIERQSAASLHGLGLTVETQDGKPVG
FGLASATEAVTLPWQEGRADYAPFERWLASDAPKIMADAKVQVKAMRRAGLAVSGLAFDV
LVAGWLLRPGFTDKTLGDLVSRYLLEDLPQPDANQLVPETEALTAPVEAWYTLRVEHALR
EVLDERTLGVMVDIEMPTLLVLVEMELRGVATDRAGLAELSAQLQERITDLAQRAFAEIG
KEINLGSPKQLQEVLFDQLAMPKTRANKTGFSTDAGALADLQASNPHPFLDLLLEHRDAS
KLRQIIQTLERGIGEDERIHTTYVQTGTTTGRISSNDPNLQNIPVRTEEGRRIRSAIRVG
EGYETLLTADYSQIEMRIMAHLSGDAGLIEAFAAGEDLHRFVGSRIFGVEPADVSPEMRT
KVKAMSYGLAYGLSAFGLSKQLRIPSSEAKQLMTDYFARFGAVRDYLRQVVEEARAAGYT
ETIFGRRRPFPDLNSPNRVLRDNAERAALNAPIQGSAADIMKIAMIRIEADMRERDMASR
MLLQVHDELILEVAPGEWDALEAIVTDRMAHAADLRVPLEVQVGRGDSWAAAAH
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaacacggaaaagcctaccctcctcgtcatcgacggccattccctggcgttccgg
gccttctacgccttgccggcggagagcttccagaaccgcgaggggcagcacacgaacgcc
gtgcacggcttcatcgcgatgctcatcaacctcctgcagaaggagaagcccacgcacgtg
ggcgtcgcgttcgacatctcgcgcttctcgttccgcacgcgcgagtacccggagtacaag
ggcacgcgcggcgagacgcccgtggagttcaccgggcaggtgcccctgctcgagcgggcg
ctgaagaccatgaacatccccaccctcaccaaggaggaccacgaggcggacgacatcctc
gcgaccctcgccacgcagggtcgcgagcagggcttccgggtgctcgtggtctcgggcgac
cgcgacgccatccagctcgtcaacgacgacgtcacgctgctctacccgtccacgcagggc
gtctcccagctcacgcgctacgacgcggagaaggtgttcgagaagtacggcgtgcagccc
gggatgtacccggacatcgcggcgctcgtgggggagaccagcgacaacctcattggcgtc
gacaaggtcggcccgaagaccgcggtcaagtggctgaaccagtacggatccctcgacgcg
gtcctcgagcaccgcgacgagatctccggcaaggtcggcgacaacctccgtgcgcagtac
gagaacgtcatccgcaaccgccgcctcaaccggctgctcaccgacgtcgagctgccgctc
ggcccggctgacctcgagcgcaagcccatcgacgagcccgccctccgcgaggtgttcgcg
gtgctggagttcaagcagctgctggaccgggtgctgaagctcgagggatccggcgcctcg
gcatccagcgagggcacgcccgtcggcgcggtcgagcaggagccgtccaccgccccggcc
gccccgcgaccgcagcagctgctcgacgaggagctcgcgaagtggatcgagaggcagagc
gcggcctcgctccacggcctgggcctcacggtcgagacgcaggacgggaagcccgtcggc
ttcgggctcgcgagcgccaccgaggcggtgaccctgccctggcaggagggccgcgcggac
tacgcgccgttcgagcgctggctcgcgagcgacgccccgaagatcatggcggacgccaag
gtccaggtgaaggcgatgcgccgcgccggcctcgccgtctccggcctcgccttcgacgtc
ctcgtggccgggtggctgctgcggccggggttcaccgacaagacgctcggcgatctcgtc
agccggtacctcctggaggacctgccgcagcccgacgcgaaccagctcgtgcccgagacg
gaggcgctcacggcgcccgtcgaggcctggtacacgctccgggtcgagcacgcgctgcgc
gaggtgctcgacgagcgcacgctcggcgtcatggtcgacatcgagatgcccacgctcctc
gtgctggtggagatggagctgcgcggcgtcgccaccgaccgcgccgggctcgccgagctg
tcggcgcagctgcaggagcgcatcaccgacctcgcccagcgcgccttcgccgagatcggc
aaggagatcaacctcgggtcgccgaagcagctgcaggaggtcctcttcgaccagctcgcc
atgccgaagacgcgcgcgaacaagaccggcttcagcaccgacgccggcgcgctggccgac
ctgcaggcgtcgaacccgcacccgttcctcgacctgctcctcgagcaccgcgacgcgagc
aagctgcggcagatcatccagaccctcgagcgcggcatcggcgaggacgagcggatccac
accacctacgtgcagaccggcaccaccaccggccgcatctcctcgaacgacccgaacctg
cagaacatccccgtgcgcaccgaggagggccgccgcatccgcagcgccatccgcgtgggc
gagggctacgagacgctgctcacggccgactactcgcagatcgagatgcggatcatggcg
cacctctccggcgacgcgggtctcatcgaggcgttcgcggcgggggaggacctgcaccgc
ttcgtcggctcccgcatcttcggcgtggagcccgcggacgtcagccccgagatgcgcacc
aaggtcaaggccatgagctacggcctggcctacggcctcagcgccttcggcctgtcgaag
cagctgcgcatcccgtcgtccgaggcgaagcagctcatgaccgactacttcgcccgcttc
ggcgcggtgcgcgactacctccgacaggtcgtggaggaggcgcgcgcggccggctacacg
gagacgatcttcggccgtcgccgaccgttccccgacctcaacagcccgaaccgcgtcctc
cgcgacaacgccgagcgggccgcgctcaacgcgcccatccaggggtccgcggccgacatc
atgaagatcgcgatgatccgcatcgaggccgacatgcgcgagcgcgacatggcgtcgcgc
atgctcctgcaggtgcacgacgagctcatcctcgaggtcgccccgggggagtgggacgcc
ctcgaggccatcgtcacggaccgcatggcgcacgccgccgacctccgggtgccgctcgag
gtccaggtgggccgcggcgactcgtgggccgccgccgcgcactga
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