Clavibacter michiganensis subsp. insidiosus: VO01_08325
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Entry
VO01_08325 CDS
T03862
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Pathway
cmh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VO01_08325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmh03400
]
VO01_08325
Enzymes [BR:
cmh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
VO01_08325
DNA repair and recombination proteins [BR:
cmh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VO01_08325
RecFOR pathway proteins
VO01_08325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF460
Motif
Other DBs
NCBI-ProteinID:
AJW80482
UniProt:
A0A0D5CMF0
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All DBs
Position
complement(1746759..1747367)
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AA seq
202 aa
AA seq
DB search
MRILGIDPGLTRCGVGVVDVYADRSARLVDVQVVRTSPTSELHHRLLAVGDGIDELVDRH
RPSVVAIERVFAQDNLSTVMGVAQITGVALVGAARRGLDVALHTPSEVKAAVTGYGQADK
KQVATMVARILGLDELPTPADASDALALAICAGWRAGMSRAGVAGTPPPSARTSVADAPA
GAGPTAAQSAWLAAERAQRGRR
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
gtgcggatcctcgggatcgaccccggcctgacgcgctgcggcgtcggggtcgtggacgtc
tacgccgaccggtccgcccggctcgtcgacgtgcaggtcgtccgcaccagccccacgtcc
gagctgcaccaccggctgctcgcggtcggcgacggcatcgacgagctcgtggaccggcac
cggccgtccgtcgtcgccatcgagcgcgtcttcgcgcaggacaacctctcgacggtgatg
ggcgtggcgcagatcacgggcgtcgccctcgtcggcgcggcgcggcgcgggctcgacgtc
gccctgcacacgccgagcgaggtgaaggccgccgtcaccgggtacggccaggccgacaag
aagcaggtggcgacgatggtcgcgcggatcctcggcctcgacgagctgccgacgcccgcc
gacgcgtccgacgcgctcgccctcgcgatctgcgccgggtggcgcgccggcatgtcccgc
gccggcgtcgcggggacgccgccgccgtccgcgcgcacctccgtcgcggacgcgccggcg
ggcgcgggaccgaccgcggcgcagtccgcgtggctcgcggccgagcgtgcgcagcggggt
cggcgctag
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