Clavibacter michiganensis subsp. insidiosus: VO01_08585
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Entry
VO01_08585 CDS
T03862
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Pathway
cmh00470
D-Amino acid metabolism
cmh00550
Peptidoglycan biosynthesis
cmh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VO01_08585 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VO01_08585 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cmh01011
]
VO01_08585 (murD)
Enzymes [BR:
cmh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
VO01_08585 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cmh01011
]
Precursor biosynthesis
Amino acid ligase
VO01_08585 (murD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
TrkA_N
F420_oxidored
GntR
YuA_Gp49
Pyr_redox_2
2-Hacid_dh_C
NAD_binding_7
Oxidored_nitro
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AJW79175
UniProt:
A0A0D5CIR0
LinkDB
All DBs
Position
complement(1796024..1797568)
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AA seq
514 aa
AA seq
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MTDGTSDDGTALVRPDSLHSWHDDWTGLRVAVLGLGRTGFSVADTLIELGADVLVVAADA
SPERLALLDVIGGRLVRPTEEEPVPAELVAFAPELVVVSPGYAPAHPLPAWATEAGIPLW
GDIELAWRVRDKTGTPAEWITITGTNGKTTTTQLTAALLQEGGVRAVPCGNIGLPVLDVV
RHPDGFDVLVVELSSHQLHYMREVRPYSSAFLNLADDHLEWHGSRQAYAAAKGRVYADTR
VACVYNRADRATEDALREADVQDGARAIGFGLDAPGPSDLGIVDGILCDRAFLEERFTSA
LELTTLDELRAVGLAAPHIVQNILAAAALARSYGVSPTVVRQALQRFELDSHRIERIGER
DGVAFVDDSKATNPHAASASLAAFPSVVWLVGGLLKGVELDELIRAHAPRLRAAVVIGVE
RAEVLAAFARHAPDVTVLEVAESDTEEVMRSAVRLAAGVAREGDTVLLAPAAASMDQFTD
YADRGRRYRAAVDHHLGGAADDTAPENDADPSRG
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgacagacggcacctccgacgacggcacggcgctcgtgcgacccgactccctgcacagc
tggcacgacgactggaccgggctccgcgtcgccgtcctcggcctcgggcgcacgggcttc
tccgtcgccgacacgctgatcgagctcggcgcggacgtgctcgtggtcgcggccgacgcg
tcgccggagcggctggcgctgctggacgtcatcggcgggcgcctggtccggcccaccgag
gaggagcctgtgccggcggagctcgtggccttcgcgcccgagctcgtcgtcgtgtcgccc
ggctacgcgcccgcgcacccgctgcccgcctgggcgacggaggcggggatcccgctgtgg
ggcgacatcgagctcgcgtggcgcgtgcgcgacaagaccgggacgccggccgagtggatc
accatcaccggcaccaacggcaagaccaccaccacgcagctcacggccgcgctcctgcag
gagggcggcgtgcgtgccgtgccgtgcggcaacatcggcctgcccgtgctcgacgtcgtg
cgccacccggacggcttcgacgtgctcgtcgtcgagctctccagccaccagctgcactac
atgcgcgaggtgcggccgtactcgagcgccttcctcaacctcgccgacgaccacctcgag
tggcacgggtcccgccaggcctacgccgccgccaagggccgcgtctacgccgacacgcgc
gtcgcctgcgtctacaaccgtgccgaccgcgccaccgaggacgcgctccgcgaggccgac
gtgcaggacggcgcgcgcgccatcggcttcggcctcgacgcgccgggtccgagcgacctc
ggcatcgtcgacgggatcctctgcgaccgcgccttcctcgaggagcgcttcaccagcgcc
ctcgagctgacgaccctcgacgagctgcgcgcggtcggcctcgcggcgccgcacatcgtg
cagaacatcctcgccgcggccgcgctcgcccggtcctacggcgtctcgccgacggtcgtg
cggcaggcgctccagcgcttcgagctcgacagccaccgcatcgagcggatcggggagcgc
gacggcgtcgcgttcgtcgacgactcgaaggccacgaacccgcacgccgcatccgcgtcg
ctcgcggcgttcccctccgtggtgtggctcgtcggcggcctcctcaagggcgtcgagctc
gacgagctgatccgcgcccacgcgccgcgcctgcgcgccgccgtggtcatcggcgtcgag
cgcgccgaggtgctcgcggcattcgcgcgacacgcgcccgacgtgaccgtcctcgaggtg
gccgagagcgacactgaggaggtcatgcggtccgccgtgcggctcgcggcgggcgtggcc
cgggagggcgacaccgtcctcctggctccggcagcggcatccatggaccaattcaccgac
tacgccgatcgcggacgccgataccgggccgcggtcgaccaccacctgggaggtgcggcg
gatgacactgcccccgagaacgacgcggacccctcgcgcggctga
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