Clavibacter michiganensis subsp. insidiosus: VO01_08630
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Entry
VO01_08630 CDS
T03862
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Pathway
cmh00900
Terpenoid backbone biosynthesis
cmh01100
Metabolic pathways
cmh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
VO01_08630
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
VO01_08630
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cmh01006
]
VO01_08630
Enzymes [BR:
cmh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
VO01_08630
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
VO01_08630
2.5.1.29 geranylgeranyl diphosphate synthase
VO01_08630
Prenyltransferases [BR:
cmh01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
VO01_08630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AJW79184
UniProt:
A0A0D5CIT4
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All DBs
Position
1806489..1807610
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AA seq
373 aa
AA seq
DB search
MPESDRLVSHVQTRLDDFLTAQAAGLREISPDLVPIQEFSSDLLRGGKRFRAQFCYWGWR
SVIDLEPSPAGRPQGEERPGYRAVVGVAAGLEIFHAAALVHDDIIDRSDTRRGRPAAHRR
FEALHAASGWGGSSSGFGEAGATLLGDLLLGWSDELLIDSLLALADGSAARATRAELATM
RTQVTLGQYLDVLEEVAWPTVPEDDTLARAHNVIVYKSAKYSIEAPLVVGASLAGATPEQ
VAALRAVGLPLGIAFQLRDDVLGVFGDSAVTGKPSGDDLREGKRTVLIALARRRLPDGVR
RTVDALLGDPDLDDEQIRAVQSILRESGALDEVEGMISRHVRESLAALREAPIGARARNQ
LELLVDTVTRRVT
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaaagcgaccgcctcgtcagccacgtccagacccgcctcgacgacttcctgacg
gcccaggcggcgggactccgggagatcagcccggatcttgtgcccatccaggagttctcc
tcggatctgctgagaggcgggaagcggttccgcgcgcagttctgctactggggttggcgc
tcggtgatcgacctcgagccctcccccgccggacggccgcagggcgaggagcgaccgggc
tatcgcgcggtcgtcggggtggccgcgggcctcgagatcttccacgcggcggcgctcgtc
cacgacgacatcatcgaccgctccgacacgcgtcgcggccgacccgccgcccaccgccgc
ttcgaggcgctgcatgcggcgagcggctggggcggatcctcgtcgggcttcggcgaggcg
ggggcgaccctcctcggcgacctcctcctggggtggagcgacgagctgctcatcgactcg
ctcctggcgctggcagacgggtcggcggcgcgcgccacccgcgccgagctcgcgacgatg
cgcacccaggtcacgctcggccagtacctcgacgtgctcgaggaggtcgcatggccgacc
gtgcccgaggacgacacgctcgcccgggcccacaacgtgatcgtctacaagtccgcgaag
tacagcatcgaggcgccgctcgtcgtcggcgcgagcctggcgggggcgacgcccgagcag
gtggcggcgctccgggccgtcggcctgccgctcggcatcgccttccagctgcgcgacgac
gtgctcggcgtgttcggcgacagcgccgtgaccgggaagccgagcggagacgacctgcgc
gagggcaagcgcaccgtgctgatcgcgctggcgcgccggcggctgccggacggggtgcgc
cgcacggtcgatgcgctcctcggggatccggacctcgacgacgagcagatccgcgcggtc
cagtcgatcctccgcgagagcggcgccctcgacgaggtggaggggatgatctcccgtcac
gtccgcgagtcgctcgccgcgctgcgcgaggccccgatcggagcccgggcgaggaaccag
ctcgagctgctcgtcgacacggtcacgcgccgcgtcacctga
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