Clavibacter michiganensis subsp. insidiosus: VO01_09970
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Entry
VO01_09970 CDS
T03862
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmh03016
]
VO01_09970
Enzymes [BR:
cmh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VO01_09970
Transfer RNA biogenesis [BR:
cmh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VO01_09970
Prokaryotic type
VO01_09970
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AJW79416
UniProt:
A0A0D5CIH1
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Position
complement(2100654..2101604)
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AA seq
316 aa
AA seq
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METPTPRAAPSTASGLLLIDKRGEWTSHDLVARTRRLAGTRKVGHAGTLDPMATGLMILG
VNSSTRLLTYLVGLDKEYLATIRLGRATTTDDREGEVVSRAEPGRIRDLAVADVERAIAD
LRGTISQVPSAVSAIKVDGERAYARVRAGEEVELAAREVTVSAFDVLRFDAVEAEEDGAQ
LDLSVRITCSSGTYVRALARDLGRALGVGGHLTALRRTRVGPFHVDDAVAIDDMVVADRL
IPPADAAARLFDVLHLTDQEAVDLGHGKKLTTPDEAPTEDPLAAVAPDGRLVGLVGFRGR
TGTSIVNFPADEAGAS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccccgaccccccgcgccgcgccgtccaccgcgagcggcctgctcctcatcgac
aagcgcggggagtggacgagccacgacctcgtcgcccgcacgcgccgcctcgccggcacc
cgcaaggtcgggcacgcgggcacgctcgacccgatggcgaccggcctcatgatcctcggc
gtcaacagctccactcgcctgctcacctacctcgtcggcctcgacaaggagtacctggcg
acgatccgcctcggccgcgccaccaccacggacgaccgggagggcgaggtcgtctcgcgc
gccgagcccgggcgcatccgcgacctcgccgtcgccgacgtggagcgcgccatcgcggac
ctccgcggcaccatctcgcaggtgccgagcgccgtcagtgccatcaaggtcgacggcgag
cgcgcctacgcccgcgtccgcgccggcgaggaggtcgagctcgccgcgcgcgaggtcacc
gtctccgcgttcgacgtgctgcgcttcgacgcggtcgaggccgaggaggacggcgcgcag
ctcgacctctccgtgcggatcacctgctcctccggcacctacgtgcgcgccctcgctcgg
gacctcggccgcgcgctcggcgtcggcggccacctcacggcgctccgccgcacgcgcgtg
ggtcccttccacgtggacgacgccgtcgcgatcgacgacatggtggtcgccgaccggctg
atcccgccggcggacgccgccgcgcgcctcttcgacgtgctgcacctcaccgaccaggag
gccgtcgacctcgggcacggcaagaagctcacgacgcccgacgaggcgcccacggaggat
ccgctcgccgcggtcgcgcccgacggccggctcgtggggctggtcggcttccgcggccgc
acgggcacgtccatcgtcaacttccccgccgacgaggcgggcgcctcgtga
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