Clavibacter michiganensis subsp. insidiosus: VO01_10005
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Entry
VO01_10005 CDS
T03862
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmh03021
]
VO01_10005
03009 Ribosome biogenesis [BR:
cmh03009
]
VO01_10005
Transcription machinery [BR:
cmh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
VO01_10005
Ribosome biogenesis [BR:
cmh03009
]
Prokaryotic type
rRNA transcription factors
VO01_10005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_2
S1
KH_NusA_C
KH_1
Motif
Other DBs
NCBI-ProteinID:
AJW79423
UniProt:
A0A0D5CIF2
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All DBs
Position
complement(2108209..2109216)
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AA seq
335 aa
AA seq
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MDIDLSVLRLMEREREIPFEELVSIIEQAILTAYLKHTDQADAKPVADGVPPARVHLDRK
SGHVSVHVPELDEDGLVIGESEDSPSDFGRIAAFAAKQVINQRLRDIGDDRILGEFKGRE
GDIVAGVIQQGPNPRMIHVDLGTIEAILPPEEQVPGEKYVHGSRLRVYVTSVSRGAKGPQ
ITVSRTHPSLVRKLFALEVPEIAQGLVEIVSLAREAGHRTKIAVRATEPGINAKGACIGE
LGQRVRAVTAELNDEKIDIVDYSESLPVFVGNALSPARVTSSFVIDQATKAVRALVPDYQ
LSLAIGKEGQNARLAAKLTGAKIDIQPDSILEGDD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtggacatcgacctgagcgtcttgcgcctgatggagcgcgagcgcgagatcccgttcgag
gagctcgtctcgatcatcgagcaggccatcctcaccgcctacctcaagcacaccgaccag
gccgacgccaagcccgtcgccgacggcgtgccccccgcgcgcgtgcacctggaccgcaag
tccggccacgtgtccgtgcacgtccccgagctcgacgaggacggcctggtcatcggcgag
tccgaggacagcccgagcgatttcggccgcatcgccgccttcgccgccaagcaggtcatc
aaccagcgcctgcgcgacatcggcgacgaccgcatcctcggcgagttcaagggccgcgag
ggcgacatcgtcgcgggcgtcatccagcagggcccgaacccgcgcatgatccacgtcgac
ctcggcaccatcgaggcgatcctcccgcccgaggagcaggtgcccggcgagaagtacgtg
cacggctcgcgcctgcgcgtctacgtcacgagcgtctcgcgcggcgccaagggcccgcag
atcacggtctcgcgcacgcacccctcgctcgtccgcaagctgttcgcgctcgaggtgccg
gagatcgcgcagggcctcgtcgagatcgtctcgctcgcgcgcgaggccggccaccgcacc
aagatcgcggtgcgcgcgaccgagcccggcatcaacgccaagggcgcctgcatcggcgag
ctggggcagcgcgtccgcgcggtcacggccgagctcaacgacgagaagatcgacatcgtc
gactactccgagtcgctgcccgtcttcgtcggcaacgcgctctcgcccgcccgggtcacg
agctcgttcgtcatcgaccaggcgaccaaggccgtgcgcgcgctcgtgcccgactaccag
ctgtcgctcgccatcggcaaggagggccagaacgcccggctcgccgccaagctcacgggc
gcgaagatcgacatccagcccgactcgatcctcgagggcgacgactga
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