Clavibacter michiganensis subsp. insidiosus: VO01_10095
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Entry
VO01_10095 CDS
T03862
Name
(GenBank) RTX toxin
KO
K20276
large repetitive protein
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Pathway
cmh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VO01_10095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
fn3
Motif
Other DBs
NCBI-ProteinID:
AJW80512
UniProt:
A0A0D5CMI2
LinkDB
All DBs
Position
complement(2134511..2140519)
Genome browser
AA seq
2002 aa
AA seq
DB search
MIREWIRRHRQAATTVTGGAVVLALLTGFALVSDGYQAQRVDLDDGSVWVVNSAQQAIGR
ANTAVLELDSVVDSRSEDIDVLQAGSTVLLADRGSSRLDVVDDATSEVVDTAPLPAGAEV
MLAGSRAAILVPATGQLWLVPVAGLSAFDAASAPTLILGADAVASMGDDGTLLVYSAATG
TLSRIQADTDDTVRATVDVGPVGAPVAEAADAPADPAAALAGETVQAGDPGRPAGQRLAL
TSVDGHWALYDADARALLVDGRTVDLAGSVAADARVGLQRASSGGSGVLVAHSGGLVEVP
VAGGDPVVVSGDARGEPARPVRVAGCEYAGWTDGSGWQRCLAPAAMAGEGEQDARRTAAG
ATSGIGSMPQQAALRFVVDGARVVLNDTRGGTAWAVQRDAGLIDNWSDLIDRDRSDTVVE
QNTADTPPETDRVQQPPVAVDDDLGARPGRTTALPVLLNDHDPNGDVLVIDSVTPVDAEV
GAVDIVDEGQGLQLALAAGATGTVRFSYVVSDGRGGTATADVRVAVRAPDANAPPVQVRP
ATGAVAEGDRLQTDVLGGWYDPDGDPMYLTRASVAAPDAVSWKPEGRVVYTDAGAGGDTR
TVALQVSDGREEGSGELVVTVRRAGDVPLVAEGFVVQASLGREITVEPLTHARGGSGAIR
LAAVPARAGLQITPDLEAGTFRLEGGQAGTHLVEYTVTDGRTAATGVVRVEVRGAPASDG
RPVTVPHTVFVRALQAQDVDVLQTDFDPAGGVLVITDAVSPGDAVGVRAEVVGQRLVRIS
LTRPLDGPVDVAYRVSNGVAEATGVITVIEVPEPAVRQPPVATDDRVAVRVGDAVDIPVL
ANDEQPDGDRLRLDPVLVDPLPEGAGLLVASEDRLRYLAPDRTGDYTAVYRAVAPDGQWA
TATLTVSVREADVATNAAPVPRPLTARVLAGETVRIPVPLTGIDPDGDSVRLLGQDTGPE
KGQVVEVGPDWIDYQAGDYSTGTDAFAYAVVDGLGARATGTIRVGISTRVAGARNPVATA
DTVTVRPGRVLRVQVLANDTDPDGGALELVSVQPQAEGLVAGLDGDTVRVVAPEQAGRYG
FVYGVRNARGGSDEAFLTVIVDPAALPTRPIARDTVLQLSDVLDRSSVDVDVMRNVFSAE
GDASSLVLAVGAGYEDVARVTPDGRIRVEVGDERRIVPFTVAQPDDPSISATAFVWVPGF
ADTLPQLRVGEPRPTVASGERLVVELDEQVVAAGGRAVRIADPNSLSATHADGPVELVDE
DTIAYRSEPGYFGPAAISFTVTDGSGDGGRTAALVLPITVTPTENQPPVFTGAVIDLEPG
QSKDVDLGRLTTYPYQDDRGQLAFALEGAVAAGFRASVDGGTLRISADEGIATGQAASFP
VSVRDATQTGRAGRVDLRVVPSTRPLAQPATDEGTVTRGSATSVDVLANDQAGNPFPGTP
LTVASIRGADGASLPAGVTVTPSDDRATLAVRASADAEPGDVRVQYEVRDATGDAGRAAF
GSVVIHVQDRPGPVSALRASGFADRSLTVAFEPGAFNGSAITGYQVRVLRGGTATATVTC
PSTTCTVPTPGNGPGSSVQVEVSAVNGVGASDPVSISGLWSDVLPASPAGLAVEPLVDGV
RVSWQPSAVPSSSSPVTQYVVGVGGIARQVAADATSIEVRDPSLVAEVPVAVSVAARNSA
QVQDGTAWLAATATGTPRGAPTATGAPSAVADPADETRVTVSWPAFQGQGVDGIRYLVAA
YAPGSAPGCSVPTEGVSPWQADHGPAVDVGGATSHVFTGLATDQPVAFAVLAANSQGCTV
VEAGQLTPRTAPSTPVVTVDLPRADRGSDGVFRAVLAGARYRPGSASASAQLLYRVDGQG
DGVPVGVGQALTLPRTGAGATIQVRVVEDSGDGRPRSSGWSAPVSAGTAVDARAGDVRST
TDEAGVTTFSWTSMPPAVAGFGRGGDGGGYARSERRCGGQGAWADASSGAAGSCTVPAGG
ERILEVRVTANSGTLYTYAHRG
NT seq
6009 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgagtggatccgccgccaccgccaggccgcgacgaccgtcaccggcggggcc
gtcgtgctcgcgctcctcacgggcttcgcgctcgtgtcggacggctaccaggcgcagcgc
gtcgacctcgacgacggatccgtgtgggtcgtcaactccgcgcagcaggcgatcggccgc
gccaacacggccgtgctcgagctcgacagcgtcgtcgactcccgcagcgaggacatcgac
gtgctgcaggccggatccaccgtgctgctcgccgaccgcggcagctcgcgcctcgacgtg
gtcgacgacgcgacgagcgaggtggtcgacaccgcgccgctgcccgcgggcgccgaggtc
atgctggcgggatcccgcgccgcgatcctcgtgccggcgaccggccagctgtggctcgtg
ccggtcgccggcctctcggcgttcgacgccgcgagcgcgcccacgctgatcctcggggcc
gacgccgtcgcgtcgatgggcgacgacggcacgctcctcgtgtactcggccgcgacgggg
acgctgtcgcgcatccaggccgacacggacgacaccgtgcgggcgacggtggacgtcggc
cccgtcggcgcgcccgtggcggaggcggccgacgcgcccgccgaccccgcggccgccctc
gccggcgagaccgtgcaggcgggggatccgggccgtcccgccgggcagcgcctcgcgctc
acctccgtcgacggccactgggcgctgtacgacgccgacgcgcgcgccctcctcgtcgac
gggcggacggtcgacctcgccggatccgtcgccgccgacgcgcgcgtcggcctccagcgc
gcgtcgtcgggcggcagcggcgtgctcgtcgcccactcgggcgggctcgtcgaggtgccc
gtcgcgggcggggacccggtcgtcgtgagcggcgacgcgcgcggggagcccgcgcgtccc
gtccgcgtcgccggctgcgagtacgcgggctggaccgacggatccggctggcagcgctgc
ctcgccccggcggccatggcgggcgagggcgagcaggacgcccggcgcacggcggcgggc
gccacgagcggcatcggatccatgccgcagcaggccgccctgcgcttcgtggtcgacggc
gcgcgcgtggtgctcaacgacacgcgcggcggcaccgcctgggccgtgcagcgcgacgcg
ggcctcatcgacaattggtcggacctcatcgaccgcgaccgctccgacaccgtcgtcgag
cagaacaccgcggacaccccgcccgagaccgaccgcgtgcagcagccgcccgtcgcggtc
gacgacgacctcggggcgcggcccggccgcaccaccgcgctgcccgtgctcctcaacgac
cacgacccgaacggcgacgtgctcgtgatcgactccgtcacgcccgtggacgccgaggtc
ggcgcggtcgacatcgtggacgagggacagggcctccagctcgcgctcgccgcgggcgcg
accggcacggtgcggttctcctacgtcgtgagcgacgggcgcggcggcaccgccaccgcc
gacgtgcgcgtggccgtccgcgcacccgacgcgaacgcgccgcccgtgcaggtgcggccc
gcgaccggcgccgtcgcggagggcgaccggctgcagaccgacgtgctgggcggctggtac
gaccccgacggggatccgatgtacctcacgcgcgcgagcgtcgccgctcccgacgccgtc
agctggaagcccgagggccgcgtggtctacacggacgccggggccggcggcgacacccgc
acggtcgcgctgcaggtgtccgacgggcgcgaggagggctcgggcgagctggtcgtcacg
gtgcgccgcgccggggatgtgccactcgtggccgaggggttcgtcgtgcaggcgtcgctc
gggcgcgagatcaccgtggagccgctcacgcacgcgcgcggcgggagcggcgcgatccgg
ctggcggccgtgcccgcgcgggccgggctgcagatcacgccggacctcgaggccggcacc
ttccggctcgagggcggccaggcgggcacgcacctcgtcgagtacacggtgaccgacggg
cggaccgccgccacgggcgtggtgcgggtcgaggtgcgcggcgcccccgcgtccgacggc
cggcccgtgaccgtgccgcacaccgtgttcgtgcgcgccctgcaggcccaggacgtggac
gtgctccagaccgacttcgaccccgcgggcggcgtgctcgtgatcaccgacgcggtctcg
cccggggacgcggtgggcgtgcgcgcggaggtcgtcgggcagcggctcgtgcggatcagc
ctgacgcggccgctcgacgggcccgtcgacgtcgcgtaccgcgtgagcaacggcgtcgcc
gaggcgaccggcgtgatcaccgtgatcgaggtgcccgagcccgccgtgcgccagccgccc
gtcgcgaccgacgaccgcgtggccgtgcgcgtgggcgacgccgtggacatccccgtgctc
gccaacgacgagcagcccgacggcgaccggctgcgcctcgaccccgtgctcgtggatccg
ctccccgagggcgcgggcctgctcgtcgcgagcgaggaccgcctccgctacctcgcgccc
gaccgcacgggcgactacacggccgtctaccgcgccgtcgcgcccgacggccagtgggcg
accgcgaccctcacggtctccgtgcgcgaggccgacgtggcgaccaacgcggcgcccgtg
ccgcgcccgctcaccgcgcgcgtgctcgcgggcgagaccgtgcggatccccgtgccgctc
accggcatcgaccccgacggcgactcggtgcggctcctcgggcaggacaccggtcccgag
aagggccaggtcgtcgaggtcgggccggactggatcgactaccaggcgggcgactactcc
accggcaccgacgcgttcgcgtacgccgtggtcgacgggctgggcgcgcgggcgaccggc
acgatccgcgtgggcatcagcacgcgcgtcgcgggcgccaggaaccccgtcgcgaccgcc
gacaccgtgaccgtgcggcccggccgcgtgctccgcgtgcaggtgctcgccaacgacacg
gatccggacggcggggcgctcgagctcgtgtcggtgcagccgcaggccgaggggctcgtc
gcggggctcgacggcgacaccgtgcgcgtcgtcgcgcccgagcaggcgggccgctacggc
ttcgtctacggcgtgcggaacgcccgcggcggcagcgacgaggcgttcctcaccgtgatc
gtggatcccgccgcgctgcctacccgcccgatcgcgcgcgacacggtgctccagctgtcc
gacgtgctcgaccggtcgagcgtcgacgtcgacgtgatgcgcaacgtcttctccgcggag
ggcgacgcgtcgtcgctcgtgctcgccgtcggcgcgggctacgaggacgtggcgcgcgtg
acgcccgacggccggatccgcgtcgaggtgggcgacgagcgccgcatcgtcccgttcacc
gtcgcgcagccggacgacccgtccatctccgcgacggcgttcgtctgggtccccggcttc
gcggacacgctgccgcagctgcgcgtcggcgagccccggcccacggtggcgagcggcgag
cggctcgtggtcgagctcgacgagcaggtggtcgcggcgggcgggcgcgcggtgcggatc
gccgacccgaactcgctctcggcgacccacgccgacgggcccgtggagctcgtggacgag
gacaccatcgcctaccggagcgagccggggtacttcgggcccgcggcgatctcgttcacg
gtgaccgacggatccggcgacggcgggcgcaccgccgcgctcgtgctgccgatcacggtg
acgcccaccgagaaccagccgcccgtgttcacgggcgcggtcatcgacctcgagcccggg
cagtccaaggacgtcgacctcggccgcctcaccacctacccgtaccaggacgaccgcggg
cagctcgcgttcgcgctggagggggcggtcgccgccgggttccgcgcgtcggtggacggc
ggcacgctccgcatctccgccgacgagggcatcgcgacgggccaggccgcgtccttcccc
gtgagcgtgcgcgacgcgacgcagaccggccgcgcgggccgcgtcgacctccgcgtcgtg
ccgtcgacgcgcccgctcgcgcagcccgcgaccgacgaggggaccgtgacgcgcggatcc
gccacctccgtcgacgtgctcgccaacgaccaggcgggcaaccccttcccgggcacgccg
ctgacggtcgcctccatccgcggcgccgacggcgcgagcctccccgcgggcgtcaccgtg
acgccgtccgacgaccgcgcgaccctcgccgtgcgcgcgtccgccgacgccgagcccggc
gacgtgcgcgtgcagtacgaggtgcgcgacgccacgggcgacgcgggccgggcggcgttc
ggctccgtcgtgatccacgtgcaggaccgcccggggcccgtctcggccctccgcgcctcc
ggcttcgcggaccgctcgctcacggtggcgttcgagccgggcgccttcaacggatccgcc
atcacgggctaccaggtgcgcgtcctccgcggcggcacggcgaccgcgaccgtcacctgc
ccgtcgacgacgtgcaccgtgccgacgcccggcaacggaccggggagctccgtgcaggtg
gaggtctccgcggtgaacggcgtgggcgcctcggaccccgtgtcgatctcgggcctctgg
tcggacgtgctcccggcctcgcccgcgggcctcgccgtcgagccgctcgtcgacggggtg
cgcgtctcgtggcagccgtcggccgtgccgtcgtcgtcgagccccgtcacgcagtacgtc
gtgggcgtgggcggcatcgcccggcaggtcgcggcggacgccacgagcatcgaggtgcgg
gatccatcgctcgtcgccgaggtgcccgtcgccgtctcggtggccgcgcgcaacagcgcc
caggtgcaggacggcaccgcgtggctcgccgccaccgcgaccggcacgccgcgcggcgcc
ccgaccgcgaccggcgcgccctccgcggtcgccgacccggccgacgagacgcgcgtgacc
gtgtcgtggccggcgttccagggccagggcgtcgacgggatccgctacctcgtcgccgcg
tacgccccggggtccgcgcccggctgctccgtgccgaccgagggcgtgtcgccgtggcag
gccgaccacggccccgcggtcgacgtgggcggcgcgaccagccacgtgttcacgggcctc
gccacggaccagcccgtcgcgttcgcggtgctcgccgccaacagccagggctgcacggtc
gtcgaagcaggccagctcacgccgcgcacggcgccgtccacgcccgtcgtcacggtcgac
ctgccgcgcgcggaccgggggagcgacggcgtgttccgcgcggtcctcgcgggcgcccgc
taccggccgggcagcgcgtccgcgtccgcccagctgctgtaccgcgtcgacgggcagggc
gacggcgtgcccgtcggcgtcggccaggcgctcaccctgccgcgcacgggcgccggcgcg
acgatccaggtgcgcgtggtcgaggactcgggtgacgggcgcccgcgctcgagcggctgg
tcggctcccgtctccgccggcaccgcggtcgacgcgcgcgcgggcgacgtgcggtcgacg
accgacgaggcgggcgtcacgaccttctcctggacctcgatgccgccggcggtggccggc
ttcgggcgcggcggcgacggcggcgggtacgcgcgcagcgagcggcgctgcggcggccag
ggcgcgtgggccgacgcgtcctcgggcgcggccggatcctgcacggtcccggcgggcggc
gagcggatcctcgaggtgcgcgtcaccgcgaactcgggcaccctgtacacgtacgcccac
cgcggatga
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