Clavibacter michiganensis subsp. insidiosus: VO01_11555
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Entry
VO01_11555 CDS
T03862
Name
(GenBank) ABC transporter
KO
K09695
lipooligosaccharide transport system ATP-binding protein
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Pathway
cmh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VO01_11555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmh02000
]
VO01_11555
Transporters [BR:
cmh02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipooligosaccharide transporter
VO01_11555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA_29
AAA_30
AAA_27
AAA_23
MeaB
DUF4162
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
AJW79680
UniProt:
A0A0D5CK91
LinkDB
All DBs
Position
complement(2441899..2442825)
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AA seq
308 aa
AA seq
DB search
MPTPVITADRLVKKYGDHVAVDGLSFEVAPGESFGLLGPNGAGKSTTMRMIGAVSSRTGG
SLDILGLDPDTHGPEIRSQLGVVPQADNLDLELKARDNLIVYGRYFGLPRKQVAARADEL
LEFAQLSDRAGAKVDDLSGGMKRRLTIARALISDPRILLLDEPTTGLDPQARHILWDRLF
RLKEQGTTLVLTTHYMDEAEQLCDRIVVVDEGRIMAEGSPASLIRDHSSREVLEVRFGSD
RNESASREIAGYGDRVEVLPDRVLVYASDGEAVLSRILEQGLKPITTLVRRSSLEDVFLR
LTGRSLVE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgcccacccccgtcatcaccgccgaccgcctcgtgaagaagtacggcgaccacgtcgcc
gtcgacggcctctccttcgaggtcgcgcccggcgagtccttcgggctgctcggcccgaac
ggcgccgggaagtccacgaccatgcgcatgatcggcgcggtctcctcgcgcacgggaggg
tccctcgacatcctcgggctcgaccccgacacgcacggaccggagatccgctcgcagctg
ggcgtcgtgccgcaggccgacaacctcgacctggagctcaaggcgcgcgacaacctcatc
gtctacggccgctacttcggcctgccgcggaagcaggtcgcggcgcgcgccgacgagctg
ctcgagttcgcgcagctgagcgaccgcgccggcgccaaggtcgacgacctctccggcggc
atgaagcgacgcctcacgatcgcgcgcgccctcatcagcgacccgcggatcctgctgctc
gacgagccgacgacgggcctcgacccgcaggcccgccacatcctgtgggaccgcctgttc
cgcctcaaggagcagggcacgacgctcgtgctgaccacgcactacatggacgaggccgag
cagctgtgcgaccgcatcgtcgtggtcgacgagggccgcatcatggcggagggctcgccc
gcgtccctcatccgcgaccactcgagccgcgaggtgctcgaggtgcgcttcggctccgac
cgcaacgagtccgcgtcgcgcgagatcgccgggtacggcgaccgcgtcgaggtgctgccc
gaccgcgtgctcgtctacgcgtccgacggcgaggccgtgctcagccggatcctcgagcag
ggcctgaagcccatcaccacgctcgtgcgccgttccagcctcgaggacgtcttcctccgc
ctcacgggacggagcctggtcgagtga
DBGET
integrated database retrieval system
