Clavibacter michiganensis subsp. insidiosus: VO01_11795
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Entry
VO01_11795 CDS
T03862
Name
(GenBank) sortase
KO
K20276
large repetitive protein
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Pathway
cmh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VO01_11795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AJW79717
UniProt:
A0A0D5CKE5
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Position
complement(2496253..2501235)
Genome browser
AA seq
1660 aa
AA seq
DB search
MALHMPSRRSRLATATAFGLAAAIVAFGGTAPANAAQGDTAEAEGQLLTFSGTPDLSGLV
ALSGAYAGYAPGDTPDPQVDASDIDADVLSGVLSAQIAAGVQLGDVLTLDQAVAGGAADQ
FASAGSAGATGSAGVLTDSGAIALNTGTDDAVALDLAPLLASRGLAGVASDADISLGAVS
ATATDPGDGAVVRDYRIASADATIVSPLVGALADDVNGAVQQLAPGATAQVALSADVDGI
LTGVVGPLLTGVVDIATPTGNIVTTVDTAAAVRAVLAEPLTSDGVTVDLDAGTVTLDIAQ
YIQATEGATLNDLDPNTELLSAPVLAGVVSGLLSDALPAAVLEATLDATRVVVNVDAGVR
LLNGLGVAVPVGTVSIDIDTTLANLLNPTGPGNEAPDIDVATTVLLLDAGALVQPLVDQL
LPSIRTSTGNLLELSDVTAVTTPLIGSLAPAVDALADVVQLTANVQGASEFEDPEAADAT
GDAVTALRIALLPVVGGPVLDLATARVRAVVPAADDVVIQAPAEGQLVPLPAGATTVAVP
VTGIADPDATVTLSVDGGAESQPVDVDADGTFALTTAALPAGTYTATVTQTIGGAPAGSD
TVTFVVGAPLATLTITTPTPGQILLTTPTDPTFDVPIEGAADPRADVTVTIPGQAPQTEP
VGTDGLYDVVFPDLGTGTYTATVTQQFGGVQTTETVTFTVGAPAAEITITSPDDDDLILS
AGAVPTADVPVTGAADPRASVTVTIPGQDPQTELVGDDGIYDVLFADLPVGTYTATATQS
IGGVAAGTETVTFSVVAPAVAVVIDAPTDGQDFQVPAGGNAVDVTVNGSADPRGSVLIAV
TGQTPITQVVGDDGRFEATFPGLTAAGYTVTVTQTVAGTLAGSDTADFTVSVAGVDQVVI
ETPGDGDFIPLPDGDTTVAVPVTGTADPDATVTLTVGDVTTGPAEVDDDGDFTLTTPGLP
SGTYTGTVTQTIGGVAVGTDTVTFTVGVPVVIDSPFDFQTFPLGGGATTRDVPVSGTADP
LGTVTVSIVGLDPITTEVDEDGNYSVTFFGLERGSYEAIATQTIGGAPAGDATVEFDVGV
DGEEGTDSDAVAAVDVDGDGTDGTDGGVDADGGTDADAVDADGAADAAGADATDAAGADA
TDAAGTDATDAAGADATDAAGTDATDAAGADATDAAGTDATDAAGTDATDAAGTDATDAA
GTDATDAAGTDATDAAGADAADAAGADATDAAGADATDAAGTDATDAAGTDATDAAGTDA
TDAAGTDATDAAGTDATDAAGADAADAAGADATDAAGADATDAAGADATDAAGTDATDAA
GTDATDAAGTDATDAAGTDATDADAAGTDATDAAGTDAADAAGTDATDAAGADATDAAGT
DATDAAGADATDAAGTDATDAAGTDAADAAGTDATDAAGTDAADAAGTDATDAAGADATD
AAGTDATDAAGTDATDAAGTDATDADAAGADAADAAGADATDAAGTDAADATDAADATDG
STDGGDAPTRAVVRFAEIVRGSGSMQMVDASGFIPGETLNATVFSTPKPLTPMVADADGR
ATFMFEIGPDFELGDHRVEVIGVDSGMADEMITRFRVVGSTVPAGQPGTPISGGYSGGYG
GGILPVTGGDGDGMLLLGGIALLMMLTGAGALHRGRNRRA
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atggctctacacatgcccagccgcagaagcaggctggcgaccgcgacggccttcgggctc
gccgcggcgatcgtcgcgttcgggggcaccgcgcccgcgaacgccgcacagggagacacg
gcggaggccgaaggccagctgctgacgttctccggcaccccggacctgtccgggctggtg
gcgctctcgggcgcctacgccggatacgcgcccggcgacaccccggacccgcaggtggac
gcgagcgacatcgacgccgacgtcctgagcggcgtgctctccgcgcagatcgccgcgggc
gtccagctcggcgacgtgctcacgctcgaccaggcggtcgcgggcggcgcggccgaccag
ttcgcctcggcgggctcggccggcgcgacgggatccgcgggcgtcctcaccgactccggg
gccatcgccctcaacacgggcaccgacgacgccgtggcgctcgacctcgcgcccctgctc
gcgtcgcggggcctcgccggcgtcgcgtcggacgcggacatctccctcggcgcggtctcc
gcgaccgctacggatcccggtgacggcgcggtcgtccgggactaccgcatcgcctccgcg
gacgccaccatcgtcagcccgctcgtcggcgcgctcgccgacgacgtcaacggcgccgtg
cagcagctcgcgccgggagcgacggcccaggtcgcgctctccgcggacgtcgacggcatc
ctcaccggcgtcgtcggccccctcctcaccggcgtcgtggacatcgcgacccccaccggg
aacatcgtcaccacggtggacacggccgcggccgtacgagccgtgctggccgagcccctg
actagcgacggcgtgaccgtcgacctcgacgcgggcacggtcacgctcgacatcgcccag
tacatccaggccaccgagggcgcgaccctcaacgacctcgacccgaacacggagctgctg
tccgcgcccgtgctcgccggcgtcgtcagcggcctgctcagcgacgccctcccggcagct
gtgctcgaggcgaccctcgacgcgacgcgcgtggtcgtgaacgtggacgcgggcgtccgc
ctgctcaacgggctgggcgtcgccgtccccgtcggcaccgtgagcatcgacatcgacacg
acgctggccaacctcctcaaccccacggggccggggaacgaggcgccggacatcgacgtc
gcgacgaccgtgctgctgctcgacgccggtgcgctcgtgcagccgctcgtggaccagctc
ctcccgtccatccggacgtcgacgggcaacctgctcgagctgagcgacgtcacggccgtg
acgaccccgctcatcggatccctcgcgcccgctgtcgacgctctcgcggacgtcgtgcag
ctgacggcgaacgtgcagggtgcgagcgagttcgaggacccggaggcagccgacgcgacc
ggggacgccgtcacggcgctccgcatcgcgctgctccccgtggtgggcggcccggtcctc
gacctggccaccgcccgggtgcgcgccgtcgtccccgcggccgacgacgtggtgatccag
gcgccggctgaggggcagctcgtcccgctccccgcaggcgcgaccaccgtggcggtcccc
gtcacgggtatcgccgaccccgacgccaccgtcacgctcagcgtcgacggcggtgccgag
tcgcagccggtcgacgtcgacgcagacgggacgttcgccctcacgaccgcggccctgccc
gccgggacctacacggcgacggtgacccagaccatcggcggcgcgcccgcgggatccgac
accgtgaccttcgtggtcggtgcaccgctcgcgacgctcacgatcacgacgccgacgccc
ggtcagatcctcctgacgacgcctaccgacccgacgttcgacgtgcccattgagggcgcg
gcggacccgcgcgcggacgtcacggtgacgatccccggccaggccccgcagaccgagccg
gtcgggaccgacgggctctacgacgtggtcttccccgatctcggcaccggcacctacacg
gcgacggtgacgcagcagttcggcggcgtccagacgacggagacggtgaccttcacggtc
ggcgccccggccgccgagatcaccatcacctcgccggacgacgacgacctgatcctcagc
gccggcgccgtgccgacggccgacgtccccgtgaccggcgccgccgacccgcgtgccagc
gtgacggtgaccatccccggccaggacccgcagaccgagctcgtcggtgacgacgggatc
tacgacgtgctgttcgccgacctcccggtcggcacgtacacggcgaccgcgacccagtcg
atcggcggcgtcgccgccggcacggagacggtgaccttctcggtcgtcgcacccgcggtc
gccgtggtcatcgacgccccgaccgacgggcaggacttccaggtcccggccggcgggaac
gcggtggacgtgaccgtgaacggcagcgcggatccgcgtggatccgtgctcatcgcggtg
acgggccagaccccgatcacgcaggtggtcggagacgacgggcgcttcgaggcgacgttc
cccggtcttacggcggcgggctacaccgtcaccgtgacgcagaccgtggccggcaccctc
gcgggcagcgacacggctgacttcaccgtctccgtcgccggcgtcgaccaggtcgtcatc
gagacccccggggacggcgacttcatcccgctgcccgacggggacaccaccgtcgccgtc
ccggtgacgggcacggccgaccccgacgccaccgtcaccctgacggtcggcgacgtgacg
accggtccggccgaggtggacgacgacggcgacttcacgctgacgacgcccggcctgccc
tcgggcacctacacgggcaccgtcacgcagacgatcggcggcgtcgccgtcggcaccgac
accgtgaccttcacggtcggcgtgccggtggtcatcgactcgccgttcgacttccagacc
ttcccgctcggcggcggggcgaccacccgggacgtgcccgtctccggcacggccgaccca
ctgggcacggtgacggtttccatcgtggggctcgacccgatcaccacggaggtggacgag
gacgggaactactcggtgacgttcttcggcctggagcgcggatcctacgaggcgatcgcg
acccagaccatcggcggcgctcctgccggcgacgcgacggtcgagttcgacgtcggcgtg
gacggcgaggagggcaccgactccgacgccgtggccgcggtcgacgtggacggcgacggc
acggacggcaccgacggcggcgtggacgcggatggcggcacggatgccgacgcggtcgac
gccgacggcgccgcggatgccgctggcgcggacgcgaccgatgccgccggtgcggacgcg
accgatgccgctggcactgacgccacggacgctgccggtgcggacgcgacggatgctgcc
gggacggacgcgacggacgctgctggcgccgacgcgaccgacgctgctggcaccgacgcg
acggatgctgctggtactgatgcgacggatgccgctggcaccgatgcgacggacgctgcg
ggcacagacgcgactgatgctgctggtacggacgcgacggatgctgctggtgcggacgcg
gctgatgctgctggtgcggacgcgacggatgctgctggcgccgacgcgaccgacgctgct
ggcaccgacgcgacggatgctgctggtactgatgcgacggatgccgctggcaccgatgcg
acggacgctgcgggcacagacgcgactgatgctgctggtacggacgcgacggatgctgct
ggtgcggacgcggctgatgctgctggtgcggacgcgacggatgctgctggtgcggacgcg
acggatgccgctggtgccgatgcgacggatgctgccggtacggacgcgacggacgctgcg
ggtacggacgcgacggacgctgccggtacggacgcgaccgatgccgctggtaccgacgcg
accgatgccgatgccgctggtaccgacgcgaccgatgccgctggtacggacgcggctgat
gctgctggtacggacgcgacggatgccgctggtgccgatgcgacggatgctgctggtacg
gacgcgacggatgccgctggtgccgatgcgacggatgctgctggtacggacgcgacggat
gccgctggtacggacgcggctgatgctgctggtacggacgcgacggatgccgctggtacg
gacgcggctgatgctgctggtacggacgcgacggatgccgctggtgccgatgcgacggac
gctgcgggtacggacgcgacggacgctgccggtacggacgcgaccgatgccgctggtacc
gacgcgaccgatgccgatgccgcgggtgcggacgcggctgatgctgccggcgcggacgcg
acggatgccgctggcaccgacgcggccgacgccacggacgccgccgacgcgaccgacgga
tccaccgacgggggcgacgcacccacccgggccgtcgtccgcttcgcggagatcgttcgc
gggagcggttcgatgcagatggtcgacgcctccgggttcatccccggtgagacgctcaac
gcgacggtgttctccacgccgaagccgctgacgccgatggtcgcggatgccgatggacgc
gcgaccttcatgttcgagatcggcccggacttcgagctcggggaccaccgggtcgaggtg
atcggtgtcgactcgggcatggccgacgagatgatcacgcggttccgggtcgtcggatcc
accgtcccggcgggccagcccggcacgccgatcagcggcgggtacagcggcgggtacggc
ggcgggatcctcccggtcacgggcggcgacggcgacgggatgctgctgctcggcggcatc
gcgctcctgatgatgctgaccggcgccggtgccctgcaccgcggccgcaaccgacgggcg
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