Clavibacter michiganensis subsp. insidiosus: VO01_11975
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Entry
VO01_11975 CDS
T03862
Name
(GenBank) ABC transporter
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmh02000
]
VO01_11975
Transporters [BR:
cmh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VO01_11975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_30
ABC_ATPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJW79747
UniProt:
A0A0D5CKH0
LinkDB
All DBs
Position
complement(2537987..2539867)
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AA seq
626 aa
AA seq
DB search
MGDIAAGGGMRGGGGRRGRVSAADAEAQRRANAEAPRVENLLGRIAELFRPHRRALVLTI
ALVLVGAGLTVVPPLLTQQAFDRGLFPPTGGPDIPVLVELVAIMIAIWIAGAGLGVWQTY
LTATVGNRVMGSMRVDLFRHLQSMELGFFTRTKTGVIQSRLQNDVGGVAAVLTNTVSSVL
GNTVTVIAALVAMLVLNWQLTLVAVVLMPVLVIVQRRVGQVRARIASKTQESLSDMTAIT
QETLSVSGILLSKSFNRQAAETARYEAENRTQIRLQVSQQMSGQWFFALVQIFLSIIPAI
VYVVAGFLITGGVSVTAGTIVAFTTVQARLMWPLIGLMRVALDLQTSGALFARIFEYLDL
EPAIRDRHDARRVAEGPALGRVAFDDVRFSYPDTRPGEPPTLDGMSFAIEPGQFAAFVGP
SGAGKTTVSYLIPRFHDVTGGRVLFSGEDVRDLEQESLLENIGIVSQETYLFHATIGENL
RYARPDATQEQIEQAARAANIHPTIESFPDGYDTLVGERGYRLSGGEKQRIAIARVLLKD
PAVLILDEATSALDAISERVVQQALDTASRGRTTIAIAHRLSTVVDADVIFVVVAGRIVE
QGTHAELLARRGEYARLYSDQRTEAA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacatcgccgcgggcggcgggatgcgcggaggcggcggacgccgcgggcgggtg
agcgcggccgacgccgaggcccagcgccgggccaacgccgaggcgccgcgcgtcgagaac
ctgctgggccggatcgcggagctgttccgcccgcaccgccgtgcgctggtcctcacgatc
gcgctcgtgctggtcggcgcgggcctcacggtcgtgccgccgctgctcacgcagcaggcc
ttcgaccgcgggctcttcccgccgacgggcggccccgacatcccggtcctcgtcgagctc
gtcgcgatcatgatcgccatctggatcgcgggcgcgggcctcggcgtctggcagacgtac
ctcaccgcgacggtcggcaaccgggtcatgggatccatgcgggtcgacctgttccgccac
ctgcagagcatggagctcggcttcttcacgcgcacgaagacgggcgtcatccagtcccgc
ctgcagaacgacgtgggcggcgtggcggccgtcctcaccaacacggtctcgagcgtgctc
ggcaacaccgtgaccgtcatcgcggcgctcgtggcgatgctcgtgctcaactggcagctc
acgctcgtggccgtggtgctcatgcccgtgctcgtgatcgtgcagcggcgcgtcggccag
gtgcgggcgcggatcgcgtcgaagacgcaggagtcgctgtccgacatgacggcgatcacg
caggagacgctctcggtctcgggcatcctgctctcgaagagcttcaaccggcaggccgcg
gagaccgcgcgctacgaggccgagaaccgaacgcagatccggctgcaggtgagccagcag
atgagcgggcagtggttcttcgcgctcgtgcagatcttcctgtcgatcatcccggccatc
gtctacgtggtcgcgggcttcctcatcacgggcggcgtcagcgtcacggcgggcaccatc
gtcgcgttcacgaccgtgcaggcgcgcctcatgtggccgctcatcggcctgatgcgcgtg
gcgctcgacctccagacctcgggcgcgctgttcgcccgcatcttcgagtacctcgacctc
gagcccgcgatccgcgaccggcacgacgcgcgcagggtggccgagggcccggcgctcggc
cgcgtcgccttcgacgacgtgcgcttctcctatccggacacgcggcccggcgagcccccg
acgctcgacggcatgtcgttcgcgatcgagcccggccagttcgccgcgttcgtcggcccg
tcgggcgcgggcaagacgacggtgtcgtacctcatcccgcgcttccacgacgtgaccggc
ggccgcgtgctcttctccggcgaggacgtgcgcgacctcgagcaggagtcgctgctggag
aacatcggcatcgtcagccaggagacgtacctcttccacgcgaccatcggcgagaacctc
cgctacgcgcgtcccgacgccacgcaggagcagatcgagcaggcggcgcgggcggcgaac
atccacccgaccatcgagtcgttccccgacgggtacgacacgctcgtgggggagcgcggc
taccggctgtccggcggtgagaagcagcgcatcgccatcgcgcgcgtgctgctgaaggac
ccggccgtgctgatcctcgacgaggccacgagcgccctcgacgcgatctcggagcgcgtc
gtgcagcaggcgctcgacaccgcgtcgcgcggccgcaccaccatcgcgatcgcgcaccgg
ctctcgaccgtggtcgacgccgacgtgatattcgtcgtcgtcgccggtcgcatcgtcgag
cagggcacgcacgccgagctgctggcccgccggggcgagtacgcgcggctctacagcgac
cagcgcaccgaggccgcctga
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