Clavibacter michiganensis subsp. insidiosus: VO01_12275
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Entry
VO01_12275 CDS
T03862
Name
(GenBank) sortase
KO
K21449
trimeric autotransporter adhesin
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmh02000
]
VO01_12275
Transporters [BR:
cmh02000
]
Other transporters
Pores ion channels [TC:
1
]
VO01_12275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
DUF1565
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
AJW79795
UniProt:
A0A0D5CKJ1
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All DBs
Position
complement(2609075..2611702)
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AA seq
875 aa
AA seq
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MRHRTPPTRSIPTRTAEHAASAPASRPRAARHLVALAVVVGLAVPAVLVVPESAQAATGQ
DLTAGTPVFSDSFTRSATGGWGAAGTAAYSYDGVSAFRANGAQGVIDLTRAGTAASAAVP
VAAPVDSEATVRVLIPRVPAQGNGVYAGLQQRVTGSSYYQSSVRVDSAGDARLSVVRVNG
STASQTTVVGDTVVARGIAPGRLVNVQSRVSGTTAVAIDARAWLDGQSVPGWQAAAVDSS
ASRLPSGTGTRLWSYLSKSSGPQSVAFDDVAIRPLTAPAAAPAPTPTPTPTPTAPAPGTG
SGSGTGSSDAEQGVSLGDARTGPGSAPVGSSSYGVPSDAVFVAPTGSNGGSGSKSSPYAT
IQKAVDAAPAGRTVVVRAGSYHESVVMPQGKALTLQSYPGEKVWLDGSRQASSWTASGSA
RYASGWTVTLDASPTYTRGKPDGTATGWQFVNPAYPMAAHPDQVWIGQQAQKQVGSRDKV
VAGTFFVDTAADRLYLGSDPGSQTVRSSDLVQALSVRGDGSTVRGIGIRRYAPSVPDLGA
VVVQARNVTVENLVITDNATTGISITATGAKATALTVARNGMLGMHANYADGLRASRLLV
ADNNTERFNRAPVSGGFKITRSRDVDVKDSAILRNAGNGLWFDESVYDANVTGNDLMDNS
GSGVAFELSATIAIVDNVVARNGEEGVWIDDTGHVDIWNNTFVANDRNIDISQGTRRASN
LATAGHDPRQKLPDPTVTWVVTDVDIANNVMQGSTGNALLAVEDHSHQRSAGQMGITTSG
NVYQRDAGNRPGWAVIWSRGAGDPAVYGSVQAFSAATGNDRTSLAIDGRPVVGSGFRLTD
EVRRVETQVAMPLIGQVAGLLGWLTGARELGADVG
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaccgcaccccacccacccgatcaatccccacccgaaccgccgagcacgccgca
tccgcccccgcatcccgtccccgcgccgcccgccacctggtcgccctcgcggtcgtcgtc
ggcctcgccgtcccggccgtgctggtcgtccccgagtccgcgcaggcggcgacgggtcag
gacctcaccgcgggcacccccgtcttctccgactccttcacccgcagcgcgaccggggga
tggggcgccgccggcaccgcggcgtactcctacgacggcgtctcggcgttccgcgccaac
ggcgcgcagggcgtcatcgacctcacccgggccggcaccgccgcgtccgccgccgtgccc
gtggcggccccggtcgacagcgaggccaccgtccgcgtgctgatcccccgcgtccccgcg
cagggcaacggcgtctacgccgggctccagcagcgcgtcacgggctcctcgtactaccag
tcgagcgtgcgggtcgacagcgccggcgacgcgcggctgtcggtcgtgcgcgtcaacgga
tccaccgcgtcgcagaccaccgtcgtcggcgacacggtcgtggcccggggcatcgcgccc
ggccgcctggtgaacgtgcagtcgcgcgtctcggggacgaccgcggtcgccatcgacgcc
cgcgcgtggctggacggccagtccgtccccggctggcaggccgccgccgtcgactcgagc
gcctcccgtctcccctcgggcacgggcacgcgcctgtggtcgtacctctcgaagtcctcc
gggccgcagtccgtggccttcgacgacgtggccatccggccgctgaccgcgccggccgcg
gcacccgcgccgacgccgaccccgaccccgacgcccaccgcgccggcccccgggacggga
tccggctcgggcaccggctcgtccgacgccgagcagggcgtctccctcggcgacgcgcgc
acgggccccggctccgcgcccgtcggatcctcctcctacggcgtgccctccgacgcggtc
ttcgtcgcgccgaccggctcgaacggcggatccggctcgaagtcgtcgccgtacgccacc
atccagaaggccgtcgatgccgctcccgccgggcgcacggtcgtcgtccgcgccggctcg
taccacgagtcggtggtgatgccgcagggcaaggccctcacgctgcagtcgtacccgggc
gagaaggtgtggctcgacggcagccgccaggcctcctcgtggacggcctccggatccgcc
cgctacgcgagcggctggaccgtcacgctcgacgcgagccccacctacacgcgtggcaag
cccgacggcaccgcgaccggctggcagttcgtcaaccccgcgtacccgatggccgcgcac
cccgaccaggtctggatcggccagcaggcgcagaagcaggtcggctcgcgcgacaaggtc
gtcgccggcacgttcttcgtcgacaccgcggccgaccgcctctacctcgggtccgacccg
ggcagccagacggtgcgctcgagcgacctcgtgcaggcgctcagcgtgcgcggcgacggc
agcacggtgcgcggcatcggcatccgccgctacgcgccctcggtgccggacctcggcgcg
gtcgtcgtgcaggcccggaacgtcacggtcgagaacctcgtgatcaccgacaacgccacc
acgggcatctcgatcacggcgacgggcgcgaaggcgaccgcgctcaccgtggcccgcaac
ggcatgctcgggatgcacgcgaactacgccgacgggctgcgcgcctcgcgcctactggtg
gccgacaacaacaccgagcgcttcaaccgggcgcccgtgtccggcgggttcaagatcacg
cgcagccgcgacgtggacgtgaaggacagcgcgatcctccgcaacgccggcaacggcctg
tggttcgacgagtcggtctacgacgcgaacgtcacgggcaacgacctgatggacaactcg
ggatcgggcgtcgccttcgagctctccgcgaccatcgcgatcgtcgacaacgtggtggcc
cgcaacggcgaggagggcgtctggatcgacgacaccggccacgtcgacatctggaacaac
accttcgtcgccaacgaccggaacatcgacatctcgcagggcacgcgccgcgcgtcgaac
ctcgcgacggccggccacgacccccgccagaagctgccggaccccaccgtgacgtgggtg
gtgaccgacgtcgacatcgcgaacaacgtgatgcagggatccaccggcaacgccctgctg
gccgtcgaggaccactcgcaccagcgctccgccggccagatgggcatcacgacctccggc
aacgtctaccagcgcgacgcggggaaccgccccggctgggccgtgatctggtcccgcggc
gccggcgacccggccgtctacggatccgtgcaggcgttcagcgccgcgaccgggaacgac
cgcacgtcgctcgcgatcgacgggcgcccggtcgtgggatccgggttccggctcaccgac
gaggtgcgccgcgtcgagacgcaggtggccatgccgctcatcggccaggtggcgggcctc
ctcggctggctgaccggcgcgcgcgagctcggggccgacgtgggctga
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