Clavibacter michiganensis subsp. insidiosus: VO01_13635
Help
Entry
VO01_13635 CDS
T03862
Name
(GenBank) RNA polymerase sigma 70
KO
K03090
RNA polymerase sigma-B factor
Organism
cmh
Clavibacter michiganensis subsp. insidiosus
Brite
KEGG Orthology (KO) [BR:
cmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmh03021
]
VO01_13635
Transcription machinery [BR:
cmh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VO01_13635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
KORA
HTH_Crp_2
MarR_2
HTH_23
HTH_38
MarR
RepB_primase_C
HTH_3
HTH_15
DUF7343
YdaS_toxin
UPF0122
HTH_37
Motif
Other DBs
NCBI-ProteinID:
AJW80027
UniProt:
A0A0D5CL84
LinkDB
All DBs
Position
2893218..2894207
Genome browser
AA seq
329 aa
AA seq
DB search
MTGTLRTRALAAAPPASRGSSPRGSASALPRTTPLPRPTPLAHDLTAARDEKRRVTHDRF
VRAAAAAEDAAGDAERRRLHDQIVLDHLELADQLARQHSGRAHDWSDLRQVGYLGLVKAA
RRYDPGFGAPFVSFAIPTISGEIKRHLRDNGWVIRPPRQVQELRHALLAVVPALTQRLGR
TPTDAELAAHTGHAREEVAEALAAHSSLRPASLDFTVHEDEGTSLADTIGTDDPGYARAE
RTVLLDAARGVLSDRDRRILHLRFVDECSQSEIAAELGVTQMQVSRLLARILGALRAELT
RGEAEALPEVAPLAAVSPIRVREDGRRTA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggaacgctgcgcacgcgcgccctcgccgccgccccgcccgcctcgcgcggatcc
tccccccgcggatccgcgtcggccctcccgcggacgaccccgctcccccgcccgacgccg
ctcgcgcacgacctcacggcggcgcgcgacgagaagcgccgcgtgacccacgaccggttc
gtgcgcgccgccgccgcggccgaggatgccgccggcgacgccgagcgccgccgcctgcac
gaccagatcgtgctcgaccacctcgagctcgccgaccagctcgcccgccagcactcgggc
cgcgcccacgactggagcgacctgcgccaggtcggctacctcggcctcgtgaaggccgcg
cgccgctacgacccggggttcggcgcgcccttcgtgtcgttcgcgatccccaccatctcc
ggcgagatcaagcgccacctgcgcgacaacgggtgggtgatccgcccgccgcggcaggtc
caggagctgcggcacgcgctgctcgcggtcgtgcccgcgctcacgcagcgcctcggccgc
acgcccaccgacgccgagctcgccgcgcacaccgggcacgcgcgcgaggaggtcgccgag
gcgctcgcggcgcactccagcctccggcccgcgtccctcgacttcacggtgcacgaggac
gagggcacctcgctcgcggacacgatcggcaccgacgaccccggctacgcgcgcgccgag
cgcaccgtgctgctggacgcggcgcgcggggtgctcagcgatcgcgaccggcggatcctg
cacctgcgcttcgtcgacgagtgcagccagtcggagatcgcggccgagctcggcgtgacg
cagatgcaggtctcgcggctgctggcgcgcatcctcggggccctgcgcgccgagctgacg
cgcggagaggccgaggccctgccggaggtggcgccgctggccgccgtgtcgccgatccgc
gtgcgcgaggacggccgccgcacggcatga
DBGET
integrated database retrieval system
