Clavibacter michiganensis subsp. michiganensis: CMM_0310
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Entry
CMM_0310 CDS
T00529
Symbol
abfA1
Name
(GenBank) alpha-L-arabinofuranosidase (Arabinosidase) (ZP_00121523.2| COG3534: Alpha-L-arabinofuranosidase [Bifidobacterium longum DJO10A]; NP_626674.1| alpha-L-arabinofuranosidase [Streptomyces coelicolor A3(2)])., pfam03662, Glyco_hydro_79n, Glycosyl hydrolase family 79,N-terminal domain., pfam06964, Alpha-L-AF_C, Alpha-L-arabinofuranosidase C-terminus.This catalyses the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides.; High confidence in function and specificity
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi00520
Amino sugar and nucleotide sugar metabolism
cmi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
CMM_0310 (abfA1)
Enzymes [BR:
cmi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
CMM_0310 (abfA1)
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Gene cluster
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Motif
Pfam:
Alpha-L-AF_C
Glyco_hydro_39
Motif
Other DBs
NCBI-ProteinID:
CAN00332
UniProt:
A5CMP6
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Position
370093..371634
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AA seq
513 aa
AA seq
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MTDAPSTTDAFPSADARIAIDRTAVVAPVNRRTFGSFVEHLGRCVYDGIYEPGHPTANAD
GFRLDVVDLVKELGSSTIRYPGGNFVSGYRWEDGVGPRAERPKRLDLAWHSLETNEVGLD
EFARWCELTGSELMMAVNLGTRGVLEALDILEYSNHPGGTALSDQRIANGSPEPHNVKMW
CLGNEMDGPWQVGHMTADDYGKLANRTAGAMKMVDPTLELVACGSSGSGMPTFGEWERTV
LEHAYDNVDFISAHAYYQERRGDLGSFLASSLDMEYFIRTVVASADQVKYRRKSDKTINI
SFDEWNVWYLDEHQESGVITEGWPYAPHLLEDVYSVADAVVLGNLMITLLKHSDRVTSAS
LAQLVNVIAPIMTETGGGAWRQTTFFPFSVTSRLAQGEVLRPRIDVGTYETEVHGTAPLV
DSVATFDEATGRAAVFLVNRSLSDALTIEVDVAGLAVSEVLEAVGIHDADVYAKNTFEDR
ERVGLTPNASATLVDGTLTITLPPVSWTAVSLG
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgccccctcgaccaccgacgccttcccgtcggccgacgcccgcatcgccatc
gaccgcaccgccgtcgtcgccccggtcaaccgccgcaccttcggctcgttcgtcgagcac
ctcggccgctgcgtctacgacggcatctacgagcccggccaccccaccgcgaacgcggac
ggcttccgcctcgacgtggtcgacctcgtcaaggagctcggctcgagcaccatccgctac
cccggcggcaacttcgtctccggctaccgctgggaggacggcgtcggcccgcgcgccgag
cgcccgaagcgcctggacctcgcctggcactcgctcgagaccaacgaggtcggcctcgac
gagttcgcgcgctggtgcgagctcaccggcagcgagctgatgatggccgtcaacctcggc
acgcgcggcgtgctggaggccctcgacatcctcgagtactcgaaccacccgggtggcacc
gccctctccgaccagcgaatcgccaacggatcccccgagccccacaacgtgaagatgtgg
tgcctcggcaacgagatggacggcccgtggcaggtcgggcacatgaccgccgacgactac
ggcaagctcgcgaaccgcaccgccggcgcgatgaagatggtggatcccacgctcgagctc
gtcgcgtgcggcagcagcggatccggcatgccgaccttcggcgagtgggagcgcaccgtg
ctcgagcacgcgtacgacaacgtcgacttcatctcggcccacgcctactaccaggagcgc
aggggcgacctcggcagcttcctcgcctcctcgctcgacatggagtacttcatccgcacg
gtcgtcgcgtcggccgaccaggtcaagtaccgccgcaagagcgacaagaccatcaacatc
tccttcgacgagtggaacgtctggtacctcgacgagcaccaggagtccggcgtcatcacc
gagggctggccctacgcgccgcacctgctcgaggacgtctactcggtcgccgacgcggtc
gtgctcggcaacctcatgatcacgctgctcaagcacagcgaccgcgtcacgtcggccagc
ctcgcgcagctcgtgaacgtgatcgcgccgatcatgacggagaccggcggcggcgcatgg
cgccagaccacgttcttcccgttctcggtcacgagccggctcgcgcagggcgaggtgctg
cgtccgcggatcgacgtgggcacgtacgagaccgaggtgcacggcaccgcgccgctcgtc
gactccgtcgccaccttcgacgaggccaccggccgcgccgcggtcttcctcgtgaaccgc
agcctgtccgacgcgctcacgatcgaggtcgacgtcgccgggctcgccgtctccgaggtg
ctcgaggccgtcgggatccacgacgcggacgtctacgcgaagaacaccttcgaggaccgc
gagcgcgtgggcctgacgccgaacgcgtcggcgacgctcgtcgacggcaccctcacgatc
acgctgccgcccgtgtcgtggacggccgtgtcgctcggctag
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