KEGG   Clavibacter michiganensis subsp. michiganensis: CMM_0515
Entry
CMM_0515          CDS       T00529                                 
Symbol
serS
Name
(GenBank) Seryl-tRNA synthetase (Serine-tRNA ligase) (ZP_00226153.1| COG0172: Seryl-tRNA synthetase [Kineococcus radiotolerans SRS30216]; CAF20916.1| SERYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]). InterPro: Seryl-tRNA synthetase serS: seryl-tRNA synthetase pfam02403, Seryl_tRNA_N, Seryl-tRNA synthetase N-terminal domain. This domain is found associated with the Pfam tRNA synthetase class II domain (pfam00587) and represents the N-terminal domain of seryl-tRNA synthetase. pfam00587, tRNA-synt_2b, tRNA synthetase class II core domain (G, H, P, S and T).; High confidence in function and specificity
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
cmi  Clavibacter michiganensis subsp. michiganensis
Pathway
cmi00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:cmi00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    CMM_0515 (serS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:cmi01007]
    CMM_0515 (serS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cmi03016]
    CMM_0515 (serS)
Enzymes [BR:cmi01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     CMM_0515 (serS)
Amino acid related enzymes [BR:cmi01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   CMM_0515 (serS)
Transfer RNA biogenesis [BR:cmi03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    CMM_0515 (serS)
 Prokaryotic type
    CMM_0515 (serS)
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N DUF2570 Turandot FlgN CinA_KH
Other DBs
NCBI-ProteinID: CAN00539
UniProt: A5CNA2
LinkDB
Position
600028..601308
AA seq 426 aa
MIDPQTLRDHPDLVIASQELRGASVEVVDQAVAADSERRRAVTEFEGLRAEQNAHGKLVA
KADKADKPRLIAEVQELKARVTAAQERAQEAESALDEAMRRIPNIVIDGVPAGGEDDWAL
VREVGAKPSFDFAPRDHLEIGEILDAIDMGRGAKVSGARFHYLKGIGARLEIALMNFGLA
RALEAGLVPLITPTLVKPEIMAGTGFLGAHADEVYHLDDDDLYLTGTSEVALAGYHADEI
LDLAQGPIRYAGWSTCYRKEAGSYGKDTRGIIRVHQFQKLEMFSYVDPADAEAEHERLLA
MQERMMQDLGLSYRVIDTAAGDLGSSAARKYDVEAWIPTQDAYRELTSTSNCTTFQARRL
GTRFRGEDGRTSPVATLNGTLATTRWIVAILETHQQADGSVRVPEALRPYLGGLEVLEPA
AAKAAR
NT seq 1281 nt   +upstreamnt  +downstreamnt
gtgatcgatccgcagaccctccgcgaccatcccgacctcgtcatcgcctcgcaggagctg
cgcggcgcatccgtggaggtggtcgaccaggcggtcgccgcggactccgagcgccgccgg
gcggtcaccgagttcgagggcctccgcgccgagcagaacgcgcacggcaagctcgtcgcg
aaggccgacaaggccgacaagccgcgcctcatcgccgaggtgcaggagctgaaggcacgc
gtcaccgccgcgcaggagcgcgcgcaggaggccgagtcggcgctcgacgaggccatgcgg
cggatcccgaacatcgtcatcgacggggtccccgccggcggtgaggacgactgggcgctc
gtacgggaggtcggcgcgaagccctcgttcgacttcgccccgcgcgaccatctggagatc
ggcgagatcctcgacgccatcgacatgggccgcggagccaaggtctccggcgcccgcttc
cactacctcaagggcatcggcgcgcggctcgagatcgccctgatgaacttcggcctcgcc
cgcgcgctcgaggcgggcctcgtgccgctcatcacccccacgctcgtgaagcccgagatc
atggccggcaccggcttcctcggcgcccacgccgacgaggtctaccacctcgacgacgac
gacctctacctcacgggcacgagcgaggtggcgctcgccgggtaccacgccgacgagatc
ctcgacctcgcccagggccccatccgctacgccggctggtcgacctgctaccgcaaggag
gcgggctcctacggcaaggacacccgcggcatcatccgcgtgcaccagttccagaagctc
gagatgttcagctacgtcgacccggccgacgccgaggcggagcacgagcgcctgctcgcc
atgcaggagcgcatgatgcaggacctcggcctctcctaccgcgtcatcgacacggcggcg
ggcgacctcggatccagcgccgcccgcaagtacgacgtcgaggcgtggatccccacccag
gacgcctaccgcgagctcacctccacctcgaactgcaccacgttccaggcccgccgcctc
ggcacgcgcttccgcggcgaggacggtcgcacctcgcccgtcgccacgctcaacggcacg
ctggcgaccacgcgctggatcgtcgcgatcctcgagacccaccagcaggcggacggttcc
gtgcgcgtgcccgaggcgctccggccctacctcggcggcctcgaggtgctcgagcccgcc
gcggcgaaggccgcccgatga

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