Clavibacter michiganensis subsp. michiganensis: CMM_0588
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Entry
CMM_0588 CDS
T00529
Symbol
hemY
Name
(GenBank) protoporphyrinogen oxidase (YP_055020.1| putative protoporphyrinogen oxidase, HemY [Propionibacterium acnes KPA171202]; ZP_00294157.1| COG1232: Protoporphyrinogen oxidase [Thermobifida fusca]). InterPro: Protoporphyrinogen oxidase proto_IX_ox: protoporphyrinogen oxidase domain; High confidence in function and specificity
KO
K00231
protoporphyrinogen/coproporphyrinogen III oxidase [EC:
1.3.3.4
1.3.3.15
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi00860
Porphyrin metabolism
cmi01100
Metabolic pathways
cmi01110
Biosynthesis of secondary metabolites
cmi01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
CMM_0588 (hemY)
Enzymes [BR:
cmi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.3 With oxygen as acceptor
1.3.3.4 protoporphyrinogen oxidase
CMM_0588 (hemY)
1.3.3.15 coproporphyrinogen III oxidase (coproporphyrin-forming)
CMM_0588 (hemY)
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
FAD_oxidored
FAD_binding_2
Pyr_redox_2
HI0933_like
DAO
AlaDh_PNT_C
Thi4
FAD_binding_3
Pyr_redox
GIDA
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
CAN00613
UniProt:
A5CNH6
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Position
667869..669308
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AA seq
479 aa
AA seq
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MSSDPRQAAGEVDPTDVVVIGGGVGGLIAARACALAGKRVILVEASPSLGGTVGSHVVDG
LRLDSGAESFATRRGTVATFLGELGLADLIVQPNPDGAWVQLAERAIQLPRTGLLGIPAH
PFDATIATAIGRAGVARAKADLLLPAAVGAKERTLGGLVRARMGDRVVDRLVAPIVSGVH
SAHPDEVDADAVAPGLRAGLAEQGSLGRAVASMRAASPAGSAVSGIVGGVHLLVDALVAD
LARLGVDVRTSLAVESVHRHRSHEGAAAYDDWHVELADGRGVDAAGVILAIPAAGLIHLF
QGLAPRAVTEGWPAPSSVELVTLVVRAPELDAAPRGTGVLVAADAPGIRAKALTHATAKW
PWLKEQAGDRHVLRLSYGRAGGDDDTAGVPDDELTAIAVHDASALLGVDLAGRVTGSARV
RWTNALPFAASGHRERVQAVRDEAAEHPGLEITGSTVAGTGLASVVADAQAAAARLLAR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtgagtagcgacccgcggcaggcagccggcgaggtcgacccgaccgacgtcgtcgtgatc
ggcggcggcgtgggcggcctcatcgccgcgcgcgcctgcgccctcgccgggaagcgcgtg
atcctcgtggaggcgtcgccctcgctcggcggcaccgtcggatcccacgtggtggacggc
ctccgcctcgacagcggcgccgagagcttcgccacccgccgcggcaccgtcgccacgttc
ctgggggagctgggcctcgcggacctgatcgtgcagccgaacccggacggggcgtgggtg
cagctcgccgaacgcgccatccagctgccgcgcacgggcctgctcgggatccccgcgcac
ccgttcgacgccaccatcgcgaccgcgatcggccgggccggcgtcgcccgcgccaaggcc
gacctcctcctccccgccgccgtcggcgcgaaggagcgcacgctcggcggcctcgtccgc
gcccgcatgggcgaccgcgtggtcgaccggctggtcgcccccatcgtctccggcgtgcac
agcgcccaccccgacgaggtcgacgccgacgcggtcgcgcccggcctccgcgccgggctc
gccgagcaggggtcgctggggcgcgcggtcgcgtcgatgcgcgccgcctctcccgcggga
tccgccgtcagcggcatcgtcggcggcgtgcacctgctggtggacgcgctggtcgccgac
ctcgcgcgcctcggcgtggacgtccgcacgtcgctcgcggtcgagtccgtgcaccggcac
cgctcccacgagggcgccgccgcgtacgacgactggcacgtcgagctcgccgacggccgg
ggcgtcgacgcggcgggcgtcatcctcgccatccccgcggcgggcctcatccacctcttc
cagggactcgcgccgcgcgcggtcacggagggctggcccgcgccgtcctccgtcgagctg
gtcacgctcgtcgtgcgcgcgcccgagctcgacgccgctccgcgcggcaccggcgtgctg
gtcgcggccgacgccccggggatccgcgccaaggccctcacgcacgccaccgccaagtgg
ccgtggctgaaggagcaggcgggcgaccgccatgtgctccgcctctcctacgggcgcgcg
ggcggcgacgacgacaccgcgggcgtccctgacgacgagctcaccgcgatcgccgtccac
gacgcgtcggcgctgctcggcgtcgacctcgccggccgcgtcaccggatccgcccgcgtg
cgctggaccaacgccctcccgttcgccgcgtccggccaccgcgagcgcgtgcaggccgtg
cgcgacgaggcggccgagcatccggggctcgagatcaccgggtccaccgtcgcgggcacc
gggctcgcctccgtggtggccgacgcgcaggccgccgcggcgcgcctcctggcccgctga
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