Clavibacter michiganensis subsp. michiganensis: CMM_0897
Help
Entry
CMM_0897 CDS
T00529
Name
(GenBank) unnamed protein product; putative cell surface protein (putative adhesin,putative hemagglutinin/hemolysin-related protein) (NP_879893.1| putative outer membrane ligand binding protein [Bordetella pertussis Tohama I]).; Conserved hypothetical protein
KO
K20276
large repetitive protein
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CMM_0897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MbnP
Motif
Other DBs
NCBI-ProteinID:
CAN00934
UniProt:
A5CPD6
LinkDB
All DBs
Position
1026122..1031185
Genome browser
AA seq
1687 aa
AA seq
DB search
MALHMPSRRSRLATATAFGLAAAIVAFGGTAPANAAPGDTAEAEGQLLTFAGTPDLSGLV
ALSGAYAGYAPGDTPDPQVDASDIDADVLSGVLSAQIAAGVQLGDVLTLDQAVAGGAADQ
FASAGSAGATGSAGVLTDSGAIAVNTGAGDAVTLDLAPLLASRGLAGVASDADISLGAVS
ATATDPGDGAVVRDYRIASADATIASPLVGALADDVNGAVQQLAPGATAQIALSADVDGI
LTGVVGPLLTGVVDIATPTGNIVTTVDTAAAVRAVLAEPLTSDGVTVDLDAGTVTLDIAQ
YIQATEGATLNDLDPNTELLSAPVLAGVVSGLLSDALPAAVLEATLDATRVVVNVDAGVR
LLNGIGIPIPVGTVSIDIDTTLANLLNPTGPGNEAPDIDVATTVLLLDAGALVQPLVDQL
LPSIRTSTGNLLELSDVTAVTTPLIGSLAPVVDALADVVQLTANVQGASEFEDPDAADAT
GDAVTALRIALLPVVGGPVLDLATARVRAVVPAADDVVIQAPAGGQLIPLPAGATTVAVP
VTGLADADATVTLSIDGGAESQPVDVAADGSFTLTTAALPAGTYTATVTQSIDGVPAGSD
TVTFVVGAPLATLTITTPTPGQILLTTTADPTIDVPVEGAADPRADVTVTIPGQTPQTET
VGTDGIYDVVFPDLGTGTYTATVTQQFGGVQTTETVTFTVGAPAAEITITSPDDDDLILS
AGTVPTADVPVTGAADPRASVTVTIPGQDPQTELVGDDGIYDVLFADLPVGTYTATATQS
IGGVASGTATVTFSVVAPAVAVVIDAPTDGQDFQVPAGGNAVDVTVSGSADPRGSVLIAV
TGQTPITQVVGDDGRFEATFPGLTAAGYTVTVTQTVAGTPAGSDTADFTVSVAAVDQVVI
ETPGDGDFIPLPDGDTTVAVPVTGTADPDATVTLTVGDVTTGPAEVDDDGDFTLTTPALP
SGTYTGTVTQTIGGVAVGTDTVTFTIGVPVVIESPFDFQTFPLTGGATTRDVPISGTADP
LGTVTVSIVGLDPIITPVDEDGNYSVTFFGLERGSYEAIATQTIGGAPAGDATVEFDVGV
DGEEGVDSDQTAAIDVDGDGTDGTDGAADAAGTDATDAAGTDATDAAGTDATDAAGTDAN
DAAGTDATDAAGTDATDAAGTDATDAAGADATDAAGTDATDAAGTDATDAAGTDATDAAG
TDATDAAGTDATDAAGADATDAAGTDATDAAGTDATDAAGTDAADAAGTDATDAAGTDAT
DAAGTDATDAAGTDATDAAGTDATDAAGTDAADAAGTDATDAAGTDATDAAGTDAADAAG
TDAADAAGTDATDAAGTDATDAAGTDATDAAGTDATDAAGTDATDAAGTDAADAAGTDAT
DAADATDAAGTDATDAAGTDATDAAGTDATDAAGTDATDAAGTDAADAAGTDAADAAGTD
ATDAAGTDATDAAGTDAADAAGTDATDAAGTDATDAAGTDATDAAGTDAADAAGTDATDA
ADATDAAGTDATDAADATDAADATDGSTDGGDAPTRAVVRFTEIVRGSGSVQMVDAFGFI
PGETLNATVFSTPKPLTPMVADADGRATFMFEIGPDFELGDHRVEVIGVDSGMADEMITR
FRVVGSTVPAGQPGTPINGGGYGGGYGGGILPVTGGDGDGMLLLGGIALLMMLTGAGALH
RGRSRRA
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atggcactacacatgcccagccgcagaagcaggctggcgaccgcgacggccttcgggctc
gccgcggcgatcgtcgcgttcgggggcaccgcgcccgcgaacgccgcaccgggggacacg
gcggaggccgagggccagctgctcacgttcgccggcaccccggacctgtccgggctggtg
gccctctcgggcgcctacgccggatacgcgcccggcgacaccccggacccgcaggtggac
gcgagcgacatcgacgccgacgtcctcagcggcgtgctctccgcgcagatcgccgcgggc
gtccagctcggcgacgtgctcacgctcgaccaggccgtcgcgggcggcgccgccgaccag
ttcgcctcggcgggctcggccggcgcgacgggatccgcgggcgtcctcaccgattcgggg
gccatcgccgtcaacacgggcgccggcgacgccgtgacgctcgacctcgcgcccctcctc
gcgtcgcggggcctcgccggcgtcgcgtcggacgcggacatctccctcggcgcggtctcc
gcgaccgctacggatcccggtgacggcgcggtcgtccgggactaccgcatcgcctccgcg
gacgccaccatcgccagcccgctcgtcggcgcgctcgccgacgacgtcaacggggccgtg
cagcagctcgcgccgggagcgacggcccagatcgcgctctccgcggacgtcgacggcatc
ctcaccggcgtcgtcgggcccctcctcaccggcgtcgtggacatcgcgacccccaccggg
aacatcgtcaccacggtggacacggccgcggccgtccgagccgtgctggccgagcccctg
acgagcgacggcgtcaccgtcgacctcgacgcgggcacggtcacgctcgacatcgcccag
tacatccaggccaccgagggcgcgaccctcaacgacctcgacccgaacacggagctgctc
tccgcgcccgtgctcgccggcgtcgtcagcggcctgctcagcgacgccctcccggcggcc
gtgctcgaggcgaccctcgacgcgacgcgcgtggtcgtcaacgtggatgcgggcgtccgc
ctgctcaacgggatcggcatccccatccccgtcggcaccgtgagcatcgacatcgacacg
acgctggcgaacctcctcaaccccacggggccggggaacgaggcgccggacatcgacgtc
gcgaccaccgtgctcctgctcgacgccggggcgctcgtgcagccgctcgtggaccagctc
ctcccgtccatccggacgtcgacgggcaacctgctcgagctgagcgacgtcacggccgtg
acgaccccgctcatcggctccctcgcgcccgtcgtcgacgctctcgcggacgtcgtgcag
ctgacggcgaacgtgcagggtgcgagcgagttcgaggacccggacgcagccgacgcgacc
ggggacgccgtcacggcgctccgcatcgcgctgctccccgtggtgggcggcccggtcctc
gacctggccaccgcccgggtgcgcgccgtcgtccccgcggccgacgacgtggtgatccag
gcgcctgccggcgggcagctcatcccgctccccgcaggcgcgaccaccgtggcggtcccc
gtcaccggcctggcggacgccgacgcgaccgtgacgctcagcatcgacggcggcgccgag
tcgcagccggtcgacgtcgccgccgacggctcgttcaccctcacgaccgcggccctgccc
gccgggacctacacggcgacggtgacccagagcatcgacggcgtgcccgcgggttccgac
accgtgaccttcgtggtcggcgcaccgctcgcgacgctcacgatcacgacgccgacgccc
ggtcagatcctcctgacgacgaccgccgacccgacgatcgacgtgcccgtggagggcgcg
gcggacccgcgcgcggacgtcacggtgacgatccccggccagaccccgcagaccgagacg
gtcgggaccgacggcatctacgacgtggtcttccccgatctcggcaccggcacctacacg
gcgacggtgacgcagcagttcggcggcgtccagacgacggagacggtgaccttcacggtc
ggtgcccccgccgccgagatcaccatcacctcgccggacgacgacgacctgatcctcagc
gccggcaccgtgccgacggccgacgtccccgtgaccggtgccgccgacccgcgcgccagc
gtgacggtgacgatccccggccaggacccgcagaccgagctcgtgggtgacgacgggatc
tacgacgtgctgttcgccgacctcccggtcggcacgtacacggcgaccgcgacccagtcc
atcggcggcgtcgcctccgggacggcgacggtgaccttctcggtcgtcgcacccgcggtg
gccgtggtcatcgacgcccccaccgacgggcaggacttccaggtcccggccggcgggaac
gcggtggacgtgacggtcagcggcagcgcggacccgcgcggatccgtgctcatcgcggtg
acgggccagacgccgatcacgcaggtggtcggagacgacgggcgcttcgaggcgacgttc
cccggtctcacggcggcgggctacaccgtcaccgtgacgcagaccgtggccggcaccccc
gcgggcagcgacacggctgacttcaccgtctccgtcgccgccgtcgaccaggtcgtcatc
gagacccccggggacggcgacttcatcccgctgcccgacggggacaccaccgtcgccgtc
ccggtgacgggcacggccgaccccgacgccaccgtcaccctgacggtcggcgacgtgacg
accggtccggccgaggtggacgacgacggcgacttcacgctgacgacgcccgccctcccc
tcgggcacctacacgggcaccgtcacgcagacgatcggcggcgtcgccgtcggcaccgac
accgtgacgttcacgatcggcgtgccggtggtcatcgagtcgccgttcgacttccagacc
ttcccgctcaccggcggggccaccacccgggacgtgcccatctcgggcacggccgacccg
ctggggacggtgacggtctccatcgtggggctcgacccgatcatcacgccggtggacgag
gacgggaactactcggtgacgttcttcggcctggagcgcggatcctatgaggcgatcgcg
acgcagaccatcggcggcgctcctgccggcgacgcgacggtcgagttcgacgtcggcgtg
gacggcgaggagggggtcgactccgaccagacggcggccatcgacgtggacggcgacggc
accgacggcaccgatggtgctgctgacgccgctggcacggatgcgacggacgctgctggt
acggacgcgacggacgctgctggtacggatgcgacggatgccgctggcactgacgcgaac
gacgctgctggcacggatgcgacggacgctgctggtacggatgcgacggacgctgctggt
acggatgcgacggacgctgccggcgctgacgcgacggatgccgctggcaccgatgcgacg
gacgctgctggtacggatgcgacggacgctgctggcactgacgcgacggatgccgctggc
accgatgcgacagacgctgctggcactgacgcgacggacgctgctggcgctgacgcgacg
gatgccgctggcaccgatgcgacggatgccgctggcaccgatgcgacggatgctgctggc
accgacgctgctgacgcggctggtaccgatgcgacggacgctgctggcactgacgcgacg
gacgctgctggcactgacgcgacggacgctgctggcactgacgcgacggatgccgctggc
accgatgcgacggacgctgctggcactgacgcggctgacgctgctggcactgacgcgacg
gatgccgctggcaccgatgcgaccgatgccgctggcaccgacgctgctgacgcggctggt
accgacgcggctgacgctgctggcactgacgcgacggacgctgctggcaccgatgcgacg
gatgccgctggcaccgatgcgacggatgctgctggcaccgatgcgacggatgctgctggt
accgacgcgacggatgccgctggtaccgacgcggctgacgccgctggcaccgacgcgacg
gacgcggctgacgccacggacgctgctggcactgacgcgacggacgctgctggcaccgat
gcgacggacgctgctggcactgacgcgacggacgctgctggcactgacgcgacggatgcc
gctggcaccgacgctgctgacgcggctggtaccgacgcggctgacgctgctggcactgac
gcgacggatgccgctggcaccgatgcgacggatgccgctggtaccgacgcggctgacgct
gctggcactgacgcgacggacgctgctggcaccgatgcgacggatgccgctggtaccgac
gcgacggatgccgctggtaccgacgcggctgacgccgctggcaccgacgcgacggacgcg
gctgacgccacggacgctgctggcaccgacgcgacggacgcggctgacgccacggacgcc
gccgacgcgaccgacggatccaccgacggcggcgacgcccccacccgggccgtcgtccgc
ttcacggagatcgtccgcgggagcggctcggtgcagatggtggacgccttcgggttcatc
cccggtgagacgctcaacgcgacggtgttctccacgccgaagccgctgacgccgatggtc
gcggatgccgatggacgcgcgacgttcatgttcgagatcggcccggacttcgagctcggg
gaccaccgggtcgaggtgatcggcgtcgactcgggcatggccgacgagatgatcacgcgg
ttccgcgtggtgggatccaccgtcccggctggccagcccggcacgccgatcaacggcggc
ggctacggcggcggctacggcggcgggatcctcccggtcaccggcggcgacggcgacggg
atgctgctgctcggaggcatcgcgctcctgatgatgctgaccggcgccggtgcactgcac
cgaggccgcagccgacgggcgtga
DBGET
integrated database retrieval system
