Clavibacter michiganensis subsp. michiganensis: CMM_0900
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Entry
CMM_0900 CDS
T00529
Name
(GenBank) DNA polymerase III gamma and tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi03030
DNA replication
cmi03430
Mismatch repair
cmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CMM_0900
03430 Mismatch repair
CMM_0900
03440 Homologous recombination
CMM_0900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmi03032
]
CMM_0900
03400 DNA repair and recombination proteins [BR:
cmi03400
]
CMM_0900
Enzymes [BR:
cmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CMM_0900
DNA replication proteins [BR:
cmi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CMM_0900
DNA repair and recombination proteins [BR:
cmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CMM_0900
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
DnaX_C
Rad17
AAA_14
AAA_30
nSTAND3
AAA_16
AAA_28
TFA2_Winged_2
AAA_18
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
CAN00937
UniProt:
A5CPE0
LinkDB
All DBs
Position
1033458..1035938
Genome browser
AA seq
826 aa
AA seq
DB search
MVTALYRRYRPENFAELIGQTQVTDPLRTALRTNRVNHAYLFSGPRGCGKTTSARILARC
LNCAEGPTDTPCGVCPSCVELSRDGSGSLDVVEIDAASHNGVDDARDIRERAVFAPARDR
YKIFILDEAHMVTPQGFNALLKIVEEPPEHVKFIFATTEPDKVIGTIRSRTHHYPFRLVP
PAQMLDYVEHLSREESVQVAPGVLPLVVRAGGGSVRDTLSLLDQLIAGSEDESVEYERAV
ALLGYTHAALLDEVIDAVARHDAAGAFAGVDRVIQTGQDPRRFVEDLLERLRDLIIVGAT
SVEGAAAVLRGTPEDELERMRAQAVAFGAVELSRAADVVNAALTEMTGATSPRLHLELLV
ARVLVPASDDTHRGALARVERLERRVGVADAGADPAPAAVAPVATPTPAPAAAPAPVATP
APVATPAPVAAADPAPDAKPTETGTSAPAASAPDEPSSSSDTSAPPAEAPSATAPAAPVT
FEQLRDSWPSVVEAVEKAKRSAWLVAVTATPRALADDVLTLSFVSANDAERFKERGAPGQ
GVSDILRTAILDVLGIRVKFIARVEPHGGAGAPAGTPAPTGGGSASPAPEASRPAASPAT
STGTRPEGGSASTTSAAVSPTASTAVTTPAASPPATKAPPARTTPAGGGWATVAIPTSDP
GAAEAPAVRAPASRPERSAPAAPAAPAAPAAPPTAPAAAPRATAPSVPARASSVVPDAHV
PDFEEPEPDEFGPAEPGWATGGASPDSAPPVARSVPAQQQQPAAAASGTGSAPRPDTAAA
APAASPAAAPQRYGESVVRELLQATFIEEKPVERKARPTIRPTGQD
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
gtggtcaccgccctgtatcgccgttaccggccagagaacttcgccgagctcatcggccag
acgcaggtgacggatccgctgcgcaccgcgctccgcaccaaccgcgtcaaccacgcgtac
ctgttcagcggcccgcgcggctgcggcaagaccacgtcggcccgcatcctcgcgcgctgc
ctcaactgcgcagagggccccaccgacaccccgtgcggcgtctgccccagctgcgtcgag
ctcagccgcgacggcagcggatccctcgacgtggtcgagatcgacgccgcgagccacaac
ggcgtcgacgacgcgcgcgacatccgcgagcgcgcggtcttcgccccggcgcgcgatcgc
tacaagatcttcatcctcgacgaggcgcacatggtcacgccgcagggcttcaacgcgctg
ctgaagatcgtggaggagccgccggagcacgtgaagttcatcttcgccaccaccgagccc
gacaaggtcatcggcacaatccgctcgcgcacgcaccactacccgttccggctcgtgccg
cccgcccagatgctcgactacgtggagcacctctcccgcgaggagagcgtgcaggtggcg
cccggcgtcctgccgctcgtggtccgcgccggcggcggatccgtgcgcgacacgctctcc
ctgctcgaccagctcatcgccgggtcggaggacgagagcgtggagtacgagcgcgcggtc
gccctcctcggctacacgcacgcggcgctgctcgacgaggtcatcgacgcggtcgcccgg
cacgacgcggccggcgccttcgcgggcgtcgaccgggtcatccagaccggccaggatccg
cgccgcttcgtggaggacctcctcgagcgcctgcgcgacctcatcatcgtcggcgccacc
tccgtcgagggcgccgccgccgtgctgcgcggcaccccggaggacgagctcgagcgcatg
cgcgcccaggccgtggccttcggcgccgtcgagctgtcgcgcgccgcggacgtggtcaac
gccgccctcaccgagatgactggcgccacctccccgcgcctccacctcgagctgctggtc
gcccgcgtgctcgtgcccgcgagcgacgacacgcaccgcggcgccctcgcccgggtcgag
cgcctcgagcgccgggtcggcgtggccgacgcgggagcggatccggcgcccgccgcggtc
gcacccgtcgcgactcccactcccgcacccgcagcggccccggctcccgtcgccacgccg
gctcccgtcgccacgccggcgccggtcgcggctgccgatccggcccccgacgcgaagccc
acggagacaggcacgtcggcaccggccgcatccgctcccgacgagccctcgtcgtcgtcc
gacacgagcgcaccgccggcggaggcaccgtcggcgaccgcacccgccgcacccgtcacc
ttcgagcagctgcgcgactcctggccgtcggtcgtcgaggcggtcgagaaggccaagcgc
agcgcctggctcgtcgccgtcacggccacgccgcgcgccctcgcggacgacgtgctcacg
ctgtccttcgtcagcgcgaacgacgcggagaggttcaaggagcgcggggctcccggccag
ggcgtcagcgacatcctgcgcaccgccatcctcgacgtgctcggcatccgcgtgaagttc
atcgcccgcgtcgagccgcacgggggcgccggcgctcccgccggcacgcccgctcccacc
ggcggcggatcggcgtcacccgcgcccgaggcctcccgcccggcggcgtcccccgcgacg
tcgaccggcacgcgtccggagggcgggagcgccagcacgacgtccgccgccgtcagcccg
accgcgtcgaccgcggtgacgacacccgcggcgtcgccacccgcgacgaaggcgccgccc
gcgaggacgaccccggccggcggcggctgggccaccgtggccatccccacatccgatccc
ggcgcagccgaggcccccgccgtccgggcgcccgcctcccgacccgagcggtcggcgccc
gcggcgcccgcggcgcccgcggcgcccgcggccccgccgaccgcaccggccgccgccccg
cgcgccacggccccgagcgtgcccgcccgcgcatcgtcggtcgtgcccgacgcgcacgtc
cccgacttcgaggagcccgagcccgacgagttcggccccgccgagcccggctgggccacc
ggcggcgcctctccggactcggccccacccgtggcccgatccgtccccgcgcagcagcag
cagcccgccgccgccgcgtccggaaccgggtccgctccacggccggacacggccgcggcc
gccccggccgcgtctcccgccgccgcgccccagcgctacggcgagtccgtggtccgtgag
ctgctccaggcgaccttcatcgaggagaagcccgtcgagcgcaaggcccgccccaccatc
cgccccacaggtcaggactag
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