Clavibacter michiganensis subsp. michiganensis: CMM_0931
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Entry
CMM_0931 CDS
T00529
Symbol
pbpE
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi00550
Peptidoglycan biosynthesis
cmi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CMM_0931 (pbpE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmi01002
]
CMM_0931 (pbpE)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cmi01011
]
CMM_0931 (pbpE)
Enzymes [BR:
cmi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CMM_0931 (pbpE)
Peptidases and inhibitors [BR:
cmi01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
CMM_0931 (pbpE)
Peptidoglycan biosynthesis and degradation proteins [BR:
cmi01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CMM_0931 (pbpE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
CAN00970
UniProt:
A5CPH1
LinkDB
All DBs
Position
1073336..1074694
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AA seq
452 aa
AA seq
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MVALLAAGAVGAGALTGRAGSASASVATTAEPTPTPSPTPTQAPPRPAPADQAARDLRMC
SISSLAQDPRLATFEGQVRDAATGRVLFDRNGSTPERTASVMKVITSAAALAALGPDRRI
ATTVVRGSEPGTVVLVGGGDPTLSRLTSGSSVYPGAPRLSDLAQQVRAAWAADPATAGTP
ITRIVLDTSLFSGDTWIPSWAASERKAGYSSFMTPLQLDADRADPVAVVSARSEDPLARV
GSTFRSMLGGSADVTQGTAPAGAAVLGEVESQPVSSLIQTALINSDNVLAESLARLVSIQ
VGAGNTQQSLATGIPKALQAYGLDTSTLTIVDGQGLSPENRVPPSLLAQLMIQVDQRQQA
LGYLHDGLPVAGRTGTLAGRFTGDSAVARGHIVAKTGWIDTGYTLAGIVDAADGTKLTFA
FYAIGNVTGDAKIALDALAAGTYRCGADLGDE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgccctgctcgccgccggcgccgtgggcgcaggcgctctgaccggtcgcgcgggc
agcgcctccgcgagcgtcgccaccaccgccgagccgacgcccacgccgagccccaccccc
acccaggcgccgccgcgtcccgcgcccgccgaccaggccgcgcgcgacctccgcatgtgc
tccatctcgtccctcgcgcaggatccgcgcctcgccacgttcgagggccaggtacgcgac
gccgcgaccggccgcgtcctgttcgaccggaacggcagcacacccgagcgcaccgcgagc
gtcatgaaggtcatcacctccgccgcggccctcgcggcgctcggccccgaccggcgcatc
gccaccacggtggtccgcgggtccgagcccggcaccgtcgtgctcgtgggcggcggggac
ccgacgctgtcgcgtctcacctccggcagctccgtctacccgggggcgccgcgcctcagc
gacctcgcgcagcaggtgcgcgcggcgtgggccgcggatcccgcgacggcaggcacgccc
atcacccgcatcgtgctcgacacctcgctcttctccggcgacacatggatcccgtcgtgg
gccgcctccgagcggaaggcggggtactccagcttcatgacgccgctgcagctcgacgcc
gaccgcgcggatcccgtcgccgtggtctccgcccgcagcgaggatccgctggcgcgcgtc
ggcagcacgttccgctccatgctgggcggatccgccgacgtcacgcagggcacggcaccg
gccggcgccgccgtgctcggcgaggtcgagtcgcagccggtctcctcgctcatccagacc
gcgctcatcaactccgacaacgtgctcgcggagtcgctcgcgcggctcgtgagcatccag
gtcggcgcgggcaacacgcagcagtcgctggcgacggggatcccgaaggcgcttcaggcg
tacgggctcgacacctccacgctcacgatcgtcgacggccagggcctcagccccgagaac
cgcgtcccgccgtcgcttctcgcgcagctgatgatccaggtggaccagcgccagcaggcc
ctcggctacctgcacgacgggctccctgtcgcgggccgtaccggcaccctggcgggccgc
ttcaccggcgacagcgccgtggcccggggacacatcgtggccaagaccggctggatcgac
accggatacacgctcgccggcatcgtcgacgcggccgacggcacgaagctgaccttcgcc
ttctacgccatcgggaacgtgacgggcgacgcgaagatcgccttggacgcgctggccgcg
ggcacgtaccgctgcggggcggacctgggggacgagtga
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