Clavibacter michiganensis subsp. michiganensis: CMM_0970
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Entry
CMM_0970 CDS
T00529
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi00020
Citrate cycle (TCA cycle)
cmi00190
Oxidative phosphorylation
cmi00650
Butanoate metabolism
cmi00720
Other carbon fixation pathways
cmi01100
Metabolic pathways
cmi01110
Biosynthesis of secondary metabolites
cmi01120
Microbial metabolism in diverse environments
cmi01200
Carbon metabolism
Module
cmi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cmi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cmi_M00149
Succinate dehydrogenase, prokaryotes
cmi_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CMM_0970
00650 Butanoate metabolism
CMM_0970
09102 Energy metabolism
00190 Oxidative phosphorylation
CMM_0970
00720 Other carbon fixation pathways
CMM_0970
Enzymes [BR:
cmi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CMM_0970
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
Pyr_redox_2
DAO
PTPA
Motif
Other DBs
NCBI-ProteinID:
CAN01009
UniProt:
A5CPL0
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Position
complement(1114637..1116460)
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AA seq
607 aa
AA seq
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MTTDTATPGSEPSASTIVDGVHYHQFDIVIVGAGGAGMRAAIEAGPQANTAVISKLYPTR
SHTGAAQGGMAAALANVEEDSWEWHTFDTVKGGDYLVDQDAAEILAKEAIDAVIDLENMG
LPFNRTPDGKIDQRRFGGHTADHGKSPVRRSCYAADRTGHMILQTLYQNCVKFGINFYNE
FYVLDLVMAEVDGKQQPAGVVALELSTGEIHVFQSKAVIFATGGFGKIYKTTSNAHTLTG
DGVGIIWRKGLPLEDMEFFQFHPTGLAGLGILLSEAARGEGAILRNSEGERFMERYAPTI
KDLAPRDIVARCMATEIREGRGAGPNKDYVYLDITHLEPAVIDAKLPDITEFARTYLGVE
PYTEPVPVLPTAHYAMGGIPTNIKAEVLSDNTTVVPGLYAAGECACVSVHGSNRLGTNSL
LDINVFGKRAGNYAAEYVKTVDFTPLPADAADFVKGLVEGARNSNGTERISTLRRELQES
MDRNAQVFRTEDTLIEVTKVIADLRERYTNIQVQDKGQRFNTDLLEAIELGFLLDLAEVV
VYSAMYRKESRGGHFREDYPTRDDENYMVHTMAYLTGDAHSTDAGDHIKLSTKPVVITNY
QPMERKY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtgaccactgacaccgcgacccccggttccgagccctccgcgagcaccatcgtggacggc
gtccactaccatcagttcgacatcgtcatcgtgggcgcgggcggcgccggcatgcgcgcg
gcgatcgaggcgggaccgcaggcgaacacggccgtcatctccaagctctacccgacgcgg
tcccacacgggcgcggcgcagggcggcatggccgcagccctcgccaacgtcgaggaggac
agctgggagtggcacaccttcgacaccgtcaagggcggcgactacctcgtcgaccaggac
gcggccgagatcctcgccaaggaggccatcgacgcggtcatcgacctcgagaacatgggc
ctccccttcaaccgcacgccggacggcaagatcgaccagcgccggttcggcggccacacg
gccgaccacggcaagagccccgtccgccgctcctgctacgcggccgaccgcacgggccac
atgatcctgcagacgctttaccagaactgcgtcaagttcggcatcaacttctacaacgag
ttctacgtgctcgacctcgtcatggcggaggtcgacgggaagcagcagcccgcgggcgtc
gtggccctcgagctgtcgaccggcgagatccacgtcttccagtcgaaggccgtgatcttc
gcgaccggcggcttcggcaagatctacaagacgacctcgaacgcgcacacgctcacgggc
gacggcgtcgggatcatctggcgcaagggcctgccgctcgaggacatggagttcttccag
ttccacccgaccggcctcgccggcctcggcatcctcctgtcggaggcggcccgcggtgag
ggcgcgatcctccgcaacagcgagggcgagcgcttcatggagcggtacgcccccaccatc
aaggacctcgcgccgcgtgacatcgtcgcccggtgcatggccaccgagatccgcgagggc
cgcggcgcgggaccgaacaaggactacgtctacctcgacatcacgcacctggagcccgcc
gtcatcgacgcgaagctccctgacatcacggagttcgcgcgcacgtacctcggcgtcgag
ccgtacacggagcccgtgcccgtgctgccgaccgcgcactacgcgatgggcggcatcccc
accaacatcaaggccgaggtcctctccgacaacacgaccgtggtgccgggcctctacgcc
gccggcgagtgcgcgtgcgtctcggtgcacggatccaaccgcctcggcaccaactcgctc
ctcgacatcaacgtcttcggcaagcgcgcgggcaactacgcggccgagtacgtgaagacg
gtcgacttcacgccgctgcccgccgacgcggccgacttcgtgaagggcctcgtcgagggc
gcccggaactccaacggcaccgagcggatctcgacgcttcgtcgcgagctgcaggagtcg
atggaccgcaacgcccaggtgttccgcaccgaggacacgctgatcgaggtcaccaaggtg
atcgccgacctgcgcgagcggtacacgaacatccaggtgcaggacaagggccagcgcttc
aacacggacctgctcgaggccatcgagctcggcttcctgctcgacctcgcggaggtcgtc
gtgtactcggcgatgtaccgcaaggagagccgcggcggccacttccgcgaggactacccc
acgcgcgacgacgagaactacatggtccacaccatggcgtacctcaccggcgacgcccac
agcacggacgccggcgaccacatcaagctgagcaccaagcccgtggtcatcacgaactac
cagccgatggagcggaagtactga
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