Clavibacter michiganensis subsp. michiganensis: CMM_1172
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Entry
CMM_1172 CDS
T00529
Symbol
tag
Name
(GenBank) putative DNA-3-methyladenine glycosylase I
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CMM_1172 (tag)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmi03400
]
CMM_1172 (tag)
Enzymes [BR:
cmi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
CMM_1172 (tag)
DNA repair and recombination proteins [BR:
cmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CMM_1172 (tag)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CAN01216
UniProt:
A5CQ63
LinkDB
All DBs
Position
complement(1338564..1339157)
Genome browser
AA seq
197 aa
AA seq
DB search
MTRASVVVGDDGVARCAWSAADPEYRRYHDEEWGRPLHGDRPLFEKLCLEGFQAGLSWIT
ILRKRPRFREVFHGFDVDAVAAMDDGDVERLMGDAGIIRNRAKILAAAGNARAVRALVDA
HGDGALDRMIWAHASDPLVRPRPTTADEIPAVTAESTALSRELKAHGLRFVGPTTVYALM
QSSGLVDDHVVGCHLAA
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgacccgggcgtcggtcgtcgtcggcgacgacggcgtcgcgcgctgcgcctggtccgcc
gccgacccggagtaccgcaggtaccacgacgaggagtggggccgtccgctgcacggcgac
cgcccgctcttcgagaagctctgcctcgagggcttccaggcgggcctgtcgtggatcacc
atcctgcgcaagcgcccgcgcttccgcgaggtcttccacggcttcgacgtcgacgcggtc
gccgccatggacgatggcgacgtcgagcggctcatgggagacgcggggatcatccgcaac
cgcgcgaagatcctcgcggccgccggcaacgcgcgcgccgtgcgtgccctcgtcgacgcg
cacggggacggcgccctcgatcggatgatctgggcgcacgcgtccgatcccctggtccgc
ccacgaccgacgacggcagacgagatccccgccgtcacggcggagtccacggccctcagc
cgcgagctgaaggcgcacggcctccgcttcgtgggccccaccaccgtctacgcgctcatg
cagtcatcgggcctcgtcgacgaccacgtcgtcggctgccacctggccgcctga
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