Clavibacter michiganensis subsp. michiganensis: CMM_1192
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Entry
CMM_1192 CDS
T00529
Symbol
rhlE
Name
(GenBank) putative ATP-dependent RNA helicase
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
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Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
CMS1
Cas3-like_C_2
HEM4
Motif
Other DBs
NCBI-ProteinID:
CAN01236
UniProt:
A5CQ83
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Position
complement(1356467..1357996)
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AA seq
509 aa
AA seq
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MTFTELNIDEDMVQALADHGILEPFPIQEQTIPLALSGQDIIGQAKTGTGKTFGFGLPLI
QRLGLTPEPGVQALVVVPTRELAVQVTEDLQIATKHRATTVVSIYGGKAYEGQIEQLKAG
AQIVVGTPGRLLDLVGQRLLSLQNVREMVLDEADKMLDLGFLSDIEKLFAQTPAVRHTML
FSATMPGPIVALARRFMTKPIHIRATDPDEGLMQANIRHLVYRAHNMDKDEVIGRILQAE
GRGKTVIFTRTKRAAARLVEELNDRGFNAAAVHGDLNQEQRERAMAAFKAGKKDILIATD
VAARGIDVLDVTHVINHTIPEDDKAYLHRVGRTGRAGKTGIAVTFVDWDDLHKWALINRA
LEFGQPEPTETYSSSPHLYTDLDIPAGSKGRLRATPTVNPDGTPRERPGSRGSDSGRDGG
RGGDRGGDRSGSRSSSTASSTGGGDRDRSRSRSTSTASATAPADATATIGSEQPNTAGGH
DAPHSDGQTRPRSRNRRRRSGGDRPTATS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgactttcaccgaactgaacatcgacgaggacatggtgcaggcgctggccgaccacggg
atcctcgaacccttccccatccaggagcagaccatccccctggcgctctccggccaggac
atcatcggccaggccaagacgggcaccggcaagaccttcggcttcggcctcccgctcatc
cagcggctcggcctcaccccggagcccggcgtgcaggcgctcgtggtcgtgccgacgcgc
gagctcgccgtccaggtcaccgaggacctccagatcgccaccaagcaccgcgccaccacg
gtcgtctccatctacggcggcaaggcgtacgaggggcagatcgagcagctcaaggccggc
gcgcagatcgtcgtcggcacgccgggccgtctcctcgacctcgtgggccagcgcctgctc
tcgctccagaacgtgcgcgagatggtgctcgacgaggccgacaagatgctcgacctcggg
ttcctctccgacatcgagaagctcttcgcgcagaccccggccgtgcgccacaccatgctg
ttctcggccaccatgccgggcccgatcgtggcgctcgcccgccgcttcatgacgaagccg
atccacatccgcgcgacggaccccgacgagggcctcatgcaggcgaacatccgccacctc
gtctaccgcgcgcacaacatggacaaggacgaggtcatcggccgcatcctccaggccgag
ggccgcggcaagaccgtcatcttcacgcgcaccaagcgcgccgccgcccgcctcgtcgag
gagctcaacgaccgcggcttcaacgccgccgccgtgcacggcgacctgaaccaggagcag
cgcgagcgcgcgatggccgcgttcaaggccggcaagaaggacatcctcatcgccaccgac
gtggcggcgcgcggcatcgacgtgctcgacgtcacccacgtgatcaaccacaccatcccc
gaggacgacaaggcgtacctgcaccgcgtcggccgcacgggccgcgcgggcaagaccggc
atcgcggtcacgttcgtcgactgggacgacctgcacaagtgggcgctcatcaaccgcgcc
ctcgagttcggccagccggagcccaccgagacgtactcgtcctcgccgcacctctacacc
gatctcgacatcccggccggatccaagggccgcctccgcgcgaccccgacggtcaacccc
gacggaaccccgcgcgagcgcccgggcagccgcggctccgactcgggtcgcgacggcgga
cgcggcggcgaccggggcggcgaccgctcgggcagccgctcctcctcgaccgcgtcctcc
accggtggcggggaccgcgaccgctcgcgcagccgcagcacgtcgaccgcgtcggccacc
gcgcccgcggacgccaccgcgacgatcggcagcgagcagccgaacacggcgggcggccac
gacgcgccccactccgacggacagacccgcccgcgctcgcgcaaccgccgtcgccgctcg
ggcggcgaccgccccaccgcgacgtcctag
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