Clavibacter michiganensis subsp. michiganensis: CMM_1200
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Entry
CMM_1200 CDS
T00529
Symbol
uvrD3
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi03420
Nucleotide excision repair
cmi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CMM_1200 (uvrD3)
03430 Mismatch repair
CMM_1200 (uvrD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmi03400
]
CMM_1200 (uvrD3)
Enzymes [BR:
cmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CMM_1200 (uvrD3)
DNA repair and recombination proteins [BR:
cmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMM_1200 (uvrD3)
MMR (mismatch excision repair)
Other MMR factors
CMM_1200 (uvrD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
CAN01244
UniProt:
A5CQ92
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All DBs
Position
1368292..1370205
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AA seq
637 aa
AA seq
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MTDQLVPGTPGRDPYGSAAPGALPAPVSLGPATADEPVEEAPSAESLLEALDDQQRLAAE
ALLGPVVVLAGAGTGKTRAITHRIAYGIQAGVYPPNRVMALTFTSRAAAELRGRLRELGA
GPVAARTFHAAALKQLNFFWPQVVGGTMPRLIESKGRMLGHAAESLRLRLDTAALRDMAA
EVEWRKVSMISVEEYGLAARTTRTLPPQLDADQAVALLQAYEDIKDQRRQLDFEDVLLAT
AGMIEAEPWVAQQVREQYRFFVVDEYQDVSPLQQTILDLWMGDRRDLCVVGDASQTIYSF
AGAKSAYLLDFASRFPEATVVRLERNYRSTSGITEAANRLMRGRPGALTLVSADADPDGD
GTGTASPRAKGRGSAAVPGGGEGFRAPQVSAFPSDGAEARAIAGAIAQQIASGIAPEDIA
VLYRMNGQSAVLEQALGDAGVSYQVRGSQRFFDRPEIKQALLALRGASVSISGEPLFKSV
SDVLRGLGWSQAPPEQPGAVRDRWESLDAIMGLAERMPAGSTFRAFTDELLERQAGQHEP
TVSAVTLATLHSAKGLEWEHVYLMGLSEGLVPISYAQTLEAVDEERRLLYVGITRARSGL
RLSWSRSGPHRSGQREPSRFLAELDTRIAGGGAKRGA
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaccagctcgtccccggcacgcccgggcgcgacccctacgggtcggccgcgccg
ggcgccctccccgcgcccgtctccctcggccccgcgaccgcggacgagcccgtggaggag
gcgccatccgcggagtccctgctcgaggcgctcgacgaccagcagaggctcgccgccgag
gcgctcctcgggcccgtcgtcgtgctcgcgggtgccggcacgggcaagacgcgggccatc
acgcaccgcatcgcctacgggatccaggccggcgtctacccgcccaaccgcgtcatggcg
ctgaccttcacctcgcgcgccgcggcggagctgcgcggtcgcctgcgcgagctcggcgcc
ggacccgtggcggcgcgcaccttccacgcggcggccctcaagcagctcaacttcttctgg
ccgcaggtggtcggcggcacgatgccgcgtctcatcgagagcaaggggcggatgctcggc
cacgccgccgagtcgctccgcctccgcctcgacacggccgcgctccgcgacatggccgcc
gaggtcgagtggcggaaggtctcgatgatctccgtcgaggagtacggcctcgcggcgcgc
accacgcgcacgctgccgccgcagctcgacgccgaccaggccgtcgcgctcctccaggcc
tacgaggacatcaaggaccagcgccgccagctcgacttcgaggacgtgctgctcgcgacc
gcgggcatgatcgaggcggagccatgggtcgcgcagcaggtgcgcgagcagtaccgcttc
ttcgtggtcgacgagtaccaggacgtctcgccgctgcagcagaccatcctcgacctctgg
atgggagaccgccgcgacctctgcgtcgtcggggacgcgagccagaccatctactcgttc
gcgggcgcgaagagcgcgtacctcctcgacttcgcgtcgcggttccccgaggcgaccgtc
gtgcggctggagcggaactaccggtcgacctcgggcatcacggaggcggcgaaccggctg
atgcgcggccgacccggcgcgctgacgctcgtgtcggcggacgcggatccggacggcgac
ggcacggggacggcctccccgcgcgcgaagggccgcggatccgccgcagtccccggcggc
ggcgagggcttccgcgcgccgcaggtgagcgcgttcccgtccgacggcgccgaggcgcgg
gcgatcgcgggcgcgatcgcccagcagatcgcctcgggcatcgcgcccgaggacatcgcc
gtgctctaccgcatgaacggccagtccgcggtgctcgagcaggcgctgggcgacgcgggc
gtcagctaccaggtgcgcggatcccagcggttcttcgaccgccccgagatcaagcaggcg
ctcctcgcgctgcgtggcgcgtccgtgtccatctcgggcgagccgctcttcaagtcggtg
agcgacgtgctccgcggcctcggatggagtcaggcgccgccggagcagccgggcgccgtg
cgcgaccgctgggagtcgctcgacgcgatcatgggcctcgccgagcggatgcccgcgggc
agcaccttccgcgccttcaccgacgagctgctcgaacggcaggcgggccagcacgagccg
accgtctcggccgtcacgctcgcgacgctgcactccgccaagggcctcgagtgggagcac
gtctacctgatggggctcagcgaggggctcgtgcccatcagctacgcgcagacgctcgag
gcggtggacgaggagcggcgcctcctctacgtggggatcacgcgcgcgcgctccgggctg
cggctgtcctggagccgcagcggaccgcatcggtcggggcagcgggagccgtcgcggttc
ctggcagagctcgacacccgcatcgcgggtgggggcgcgaagcgcggcgcgtga
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