Clavibacter michiganensis subsp. michiganensis: CMM_1293
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Entry
CMM_1293 CDS
T00529
Name
(GenBank) conserved hypothetical protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmi03400
]
CMM_1293
Enzymes [BR:
cmi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
CMM_1293
DNA repair and recombination proteins [BR:
cmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
CMM_1293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
CAN01338
UniProt:
A5CQI5
LinkDB
All DBs
Position
1466543..1468006
Genome browser
AA seq
487 aa
AA seq
DB search
MERTRWILADQLGDHFDEGGPMLLIESRGLLARRPYHRAKAHLILSGIRHRARALGDRVE
FHQVDHYREVVEGRDDLEVIDPTSRGLRRLVAEIGAEVLPSRGFVTSEQEFAEWMAGRTS
NRLVMEDFYRWSRARTGILMDGDDPVGGRWNYDHDNRERPPKGATSLGLPEPWWPEEDDI
DAEVRADLDEWERKGIVRFVGEDGPRRFAVTPEEGRLALDDFVASRLNDFGPFEDASLQG
DWTMAHSLLSATMNMGVLDPADVIERITAEHAAGRAPIQSVEGIVRQIMGWRDYVWHLYW
AFEDDYTSQNRLDAHRGVPTALQELDASGIEAACLSHVVDKVRTHGWAHHIERLMILGNL
ALQRGYDPAAMNDWFIDSFVDGTPWVMPANVVGMALHADGGRMATKPYAGGGAYIDRMSD
HCGGCPFDPKVRVGPTACPYTAGYWWFLDRNRERLRGNARMAQPLAGLGRLKDLPELVAQ
EDARRSL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcacgcgatggatcctcgccgaccagctgggcgaccacttcgacgaaggcggg
cccatgctgctcatcgagtcgcgtggcctgctcgcccggaggccgtaccaccgtgcgaag
gcgcacctcatcctctcgggcatccgacaccgcgcacgggccctgggcgaccgcgtcgag
ttccaccaggtggaccactaccgcgaggtcgtcgaggggcgggacgacctcgaggtcatc
gaccccacctcccgcgggctgcggcgcctcgtcgcggagatcggggcggaggtgctgccg
agccgcggcttcgtcacgagcgagcaggagttcgcggagtggatggcgggccgcacctcg
aaccggctcgtcatggaggacttctaccggtggtcgcgcgctcgcacgggcatcctcatg
gacggcgacgacccggtcggcggccgctggaactacgaccacgacaaccgcgagcgcccg
ccgaagggcgcgacgagcctcggcctgcccgagccgtggtggcccgaggaggacgacatc
gacgccgaggtccgcgccgacctcgacgagtgggagcgcaagggcatcgtgcgcttcgtg
ggggaggacggcccgcggcgcttcgccgtcacgcccgaggaggggcgcctcgcgctcgac
gacttcgtggccagccgcctcaacgacttcggccccttcgaggacgcgtcgctccagggg
gactggaccatggcgcactcgctcctgagcgccaccatgaacatgggcgtgctggatccg
gcggacgtcatcgagcgcatcacggccgagcacgcggccgggcgcgcgcccatccagagc
gtcgagggcatcgtgcggcagatcatgggctggcgggactacgtgtggcacctctactgg
gccttcgaggacgactacacctcgcagaaccggctcgacgcgcaccggggagtgccgacc
gcgttgcaggagctcgacgcatccggcatcgaggccgcctgcctctcccacgtcgtcgac
aaggtgcgcacgcacggctgggcgcaccacatcgagcggctcatgatcctgggcaacctc
gcgctccagcgcggctacgaccccgcggccatgaacgactggttcatcgactccttcgtc
gacggcacgccgtgggtcatgccggcgaacgtcgtcgggatggcgctgcacgcggatggc
gggcgcatggcgacgaagccctacgcgggaggcggcgcgtacatcgaccggatgtcggac
cactgcgggggctgcccgttcgacccgaaggtgcgcgtcggccccacggcctgcccgtac
acggcgggctactggtggttcctcgaccgcaaccgggagcggctccgcggcaacgcgcgc
atggcccagccgctcgcggggctggggcggctgaaggacctgccggagctggtggcgcag
gaggacgcgcggcggtcgctgtga
DBGET
integrated database retrieval system
